RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 HIST1H2AAQ96QV6 131 aa9.56□□□□□ -0.88
CHD6-208ENST00000480022 CHST11Q9NPF2 352 aa9.56□□□□□ -0.88
CHD6-208ENST00000480022 TBC1D29Q9UFV1 150 aa9.56□□□□□ -0.88
CHD6-208ENST00000480022 H7C1C5 153 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 GPR137BO60478 399 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CER1O95813 267 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 EML2O95834 649 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 PNPP00491 289 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 GUSBP08236 651 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 GLRA1P23415 457 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 EMDP50402 254 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 LCN6P62502 163 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 PRDX1Q06830 199 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 OR5I1Q13606 314 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 ETFRF1Q6IPR1 90 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 LINC01555Q8NAE3 123 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 OR52N4Q8NGI2 321 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 DOK4Q8TEW6 326 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 LPAR4Q99677 370 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CABLES2Q9BTV7 478 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 LRFN1Q9P244 771 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 POLR3KQ9Y2Y1 108 aaPredicted RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 CACNA1HO95180 2353 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 GON4LQ3T8J9 2241 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SDK1Q7Z5N4 2213 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 ZNF860A6NHJ4 632 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SCGB1D1O95968 90 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CYB5R3P00387 301 aaPredicted RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 IFNA21P01568 189 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SELEP16581 610 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 ALDH3B1P43353 468 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 NHLH1Q02575 133 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 UNC119Q13432 240 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 RNF44Q7L0R7 432 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 OTOSQ8NHW6 89 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CCDC74BQ96LY2 380 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 DNAJC4Q9NNZ3 241 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 SRPK3Q9UPE1 567 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SPAG17Q6Q759 2223 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 LMO7DNF2Z398 122 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 NSA2O95478 260 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 IL6RP08887 468 aaPredicted RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 CDKN1BP46527 198 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 NOVA1P51513 510 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 SOX8P57073 446 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CTXN1P60606 82 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 HSF1Q00613 529 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 TAF9Q16594 264 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 NKAIN1Q4KMZ8 207 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 GPR157Q5UAW9 335 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 CDRT4Q8N9R6 151 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SLC26A10Q8NG04 563 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 OR5H2Q8NGV7 314 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 ANGPTL4Q9BY76 406 aa9.55□□□□□ -0.88
CHD6-208ENST00000480022 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 YLPM1P49750 1951 aaKnown RBP9.55□□□□□ -0.88
CHD6-208ENST00000480022 GPR179Q6PRD1 2367 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 PCDH15Q96QU1 1955 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 A0A0U1RQV5 110 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 PDLIM4P50479 330 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 BTN3A2P78410 334 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 ZNF117Q03924 483 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 PNRC1Q12796 327 aaPredicted RBP9.54□□□□□ -0.88
CHD6-208ENST00000480022 DEFB133Q30KQ1 61 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 ZAR1Q86SH2 424 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 SFTPA2Q8IWL1 248 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 STT3BQ8TCJ2 826 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 FGGYQ96C11 551 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 CNTD2Q9H8S5 307 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 RYDENQ9NUL5 291 aaKnown RBP9.54□□□□□ -0.88
CHD6-208ENST00000480022 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 RHBDD3Q9Y3P4 386 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 A0A1B0GU03 582 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 CDX4O14627 284 aaPredicted RBP9.54□□□□□ -0.88
CHD6-208ENST00000480022 HNF1AP20823 631 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 GABRA3P34903 492 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 GRK6P43250 576 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 MFGE8Q08431 387 aaPredicted RBP9.54□□□□□ -0.88
CHD6-208ENST00000480022 FOXF1Q12946 379 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 SQSTM1Q13501 440 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 TMEM176BQ3YBM2 270 aaPredicted RBP9.54□□□□□ -0.88
CHD6-208ENST00000480022 SSX7Q7RTT5 188 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 ASCL5Q7RTU5 278 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 LHFPL1Q86WI0 220 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 LYPD6Q86Y78 171 aa9.54□□□□□ -0.88
CHD6-208ENST00000480022 OR1N1Q8NGS0 311 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms