RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DSCR10P59022 87 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 MRPS22P82650 360 aaKnown RBP3.87□□□□□ -1.79
UPF3A-205ENST00000479712 PLGLB1Q02325 96 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 CHRNB3Q05901 458 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 KIAA0040Q15053 153 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 TAF9Q16594 264 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 AANATQ16613 207 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 IMPG1Q17R60 797 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 KCTD21Q4G0X4 260 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 FAM71E1Q6IPT2 247 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 DGAT2L6Q6ZPD8 337 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 RPS27LQ71UM5 84 aaKnown RBP3.87□□□□□ -1.79
UPF3A-205ENST00000479712 MOB1BQ7L9L4 216 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 P2RY8Q86VZ1 359 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 C10orf107Q8IVU9 208 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 CDH26Q8IXH8 852 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 NRMQ8IXM6 262 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 FAM9CQ8IZT9 166 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 C4orf33Q8N1A6 199 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 CD177Q8N6Q3 437 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 OR2M7Q8NG81 312 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 TCP10LQ8TDR4 215 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 C16orf78Q8WTQ4 265 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 RNF138Q8WVD3 245 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 FGGYQ96C11 551 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 C10orf35Q96D05 121 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 SLC25A38Q96DW6 304 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 PYGO2Q9BRQ0 406 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 SUCNR1Q9BXA5 334 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 RSPO3Q9BXY4 272 aaPredicted RBP3.87□□□□□ -1.79
UPF3A-205ENST00000479712 EXO5Q9H790 373 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 C1orf109Q9NX04 203 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 MAT2BQ9NZL9 334 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 BOKQ9UMX3 212 aaPredicted RBP3.87□□□□□ -1.79
UPF3A-205ENST00000479712 DNAJC15Q9Y5T4 150 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 A0A1B0GUS0 222 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 GNG14A0A1W2PPG7 69 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 WI2-2373I1.2A0A1W2PRP0 233 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 HELTA6NFD8 242 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 OR6C70A6NIJ9 312 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 SMIM23A6NLE4 172 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 TMEM114B3SHH9 223 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 LSM1O15116 133 aaKnown RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 RAMP3O60896 148 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 LYPLA1O75608 230 aaPredicted RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 PSMG1O95456 288 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 SERPINE1P05121 402 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 IL3P08700 152 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 CT62P0C5K7 136 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 OR8U8P0C7N1 319 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 RBMY1CP0DJD4 496 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 PRPS2P11908 318 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 GABRA1P14867 456 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 COX5AP20674 150 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 ALDH3A1P30838 453 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 NTSP30990 170 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 LCN1P31025 176 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 HNRNPA3P51991 378 aaKnown RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 FOXA1P55317 472 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 ACTR3P61158 418 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 HMGCS1Q01581 520 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 LRRC36Q1X8D7 754 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 KRT71Q3SY84 523 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 XKR7Q5GH72 579 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 SLC25A30Q5SVS4 291 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 UTF1Q5T230 341 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 NOXRED1Q6NXP6 359 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 TRPM8Q7Z2W7 1104 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 DHDDSQ86SQ9 333 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF321PQ8N8H1 164 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 OR56B4Q8NH76 319 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 RAB3IL1Q8TBN0 382 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 PPWD1Q96BP3 646 aaKnown RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 PPP3R2Q96LZ3 170 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 KCNA7Q96RP8 456 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 SRXN1Q9BYN0 137 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 TTTY12Q9BZ98 90 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 NMUR2Q9GZQ4 415 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 Q9H3A6 140 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 YY1AP1Q9H869 796 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF275Q9NSD4 429 aaPredicted RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 DCAF16Q9NXF7 216 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 TAS2R9Q9NYW1 312 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 Q9UF83 564 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 COPS3Q9UNS2 423 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 TIMM22Q9Y584 194 aa3.86□□□□□ -1.79
UPF3A-205ENST00000479712 CHCHD2Q9Y6H1 151 aaPredicted RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
UPF3A-205ENST00000479712 NCKAP5O14513 1909 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 DNAH3Q8TD57 4116 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 IGKV3D-20A0A0C4DH25 116 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 XKRY2A2RUG3 117 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 BTBD17A6NE02 478 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 CLOCKO15516 846 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF264O43296 627 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 HPNP05981 417 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 GIG44P09565 113 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms