RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 TMEM100Q9NV29 134 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 UQCC1Q9NVA1 299 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 LPAR3Q9UBY5 353 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 C14orf166Q9Y224 244 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 DOCK10Q96BY6 2186 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 DNAJC13O75165 2243 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 ZNF850A8MQ14 1090 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 IFNA2P01563 188 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 OR5H8P0DN80 308 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 PVALBP20472 110 aaPredicted RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 GDF1P27539 372 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 RBMXP38159 391 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 FHITP49789 147 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 TAS2R46P59540 309 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 IL15RAQ13261 267 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 RAB35Q15286 201 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 IGFBP7Q16270 282 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 CALHM1Q8IU99 346 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 GPR137CQ8N3F9 429 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 OR10AD1Q8NGE0 317 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 OR11L1Q8NGX0 322 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 ERGIC1Q969X5 290 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 FOXB1Q99853 325 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 P4HTMQ9NXG6 502 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 MLXQ9UH92 298 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 PADI1Q9ULC6 663 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 DIDO1Q9BTC0 2240 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 TNRC6BQ9UPQ9 1833 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 SERPINE3A8MV23 424 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 SLC33A1O00400 549 aaPredicted RBP9.36□□□□□ -0.91
VPS52-217ENST00000478934 NRASP01111 189 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 NR2C1P13056 603 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 IL32P24001 234 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 SRD5A2P31213 254 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 CD80P33681 288 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 CBX5P45973 191 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 NPBWR2P48146 333 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 ZXDAP98168 799 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 FAM3AP98173 230 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 HFEQ30201 348 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 PSMF1Q92530 271 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 OR2H1Q9GZK4 316 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 METTL9Q9H1A3 318 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS52-217ENST00000478934 GHRLQ9UBU3 117 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 FBXL17Q9UF56 701 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 R4GN57 208 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 H7C2Y5 167 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 OR8U9P0C7N5 309 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 EDN3P14138 238 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 TGIF1Q15583 401 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 GGNBP1Q5YKI7 109 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 OR5L1Q8NGL2 311 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 OR8U1Q8NH10 309 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 BORCS8Q96FH0 119 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 AQP10Q96PS8 301 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 CMSS1Q9BQ75 279 aaKnown RBP9.36□□□□□ -0.91
VPS52-217ENST00000478934 MMP26Q9NRE1 261 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 PLA2G3Q9NZ20 509 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 LOXL2Q9Y4K0 774 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 LAMA5O15230 3695 aa9.36□□□□□ -0.91
VPS52-217ENST00000478934 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 OR6C6A6NF89 314 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 C1QL1O75973 258 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 RPL12P30050 165 aaKnown RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 FCGR2CP31995 323 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 PIGPP57054 158 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 TMEM33P57088 247 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 PJVKQ0ZLH3 352 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 DAZAP2Q15038 168 aaPredicted RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 C3AR1Q16581 482 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 UQCC3Q6UW78 93 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 UBALD2Q8IYN6 164 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 OR2V1Q8NHB1 315 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 RHBDD1Q8TEB9 315 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SGCZQ96LD1 299 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SIGLEC12Q96PQ1 595 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 GPR35Q9HC97 309 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 ST3GAL6Q9Y274 331 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 TECTAO75443 2155 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 A0A1W2PNU3 283 aaPredicted RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 K7EPK0 472 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 FCGR3AP08637 254 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 CST2P09228 141 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 RBP2P50120 134 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 DCAF12Q5T6F0 453 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 PLCXD3Q63HM9 321 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SLC22A25Q6T423 547 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 Q6ZSR3 168 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms