RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NDUFB11Q9NX14 153 aa22.28■■□□□ 1.16
CCM2-211ENST00000478582 CLN8Q9UBY8 286 aa22.28■■□□□ 1.16
CCM2-211ENST00000478582 IGKV1-12A0A0C4DH73 117 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 F8VVB4 439 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 F8VWA3 439 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 TMPRSS2O15393 492 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 KDM4BO94953 1096 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 IGKV1D-12P01611 117 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 GNB2P62879 340 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 DDI2Q5TDH0 399 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 PXT1Q8NFP0 134 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 OR5D18Q8NGL1 313 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 MED30Q96HR3 178 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 SEBOXQ9HB31 216 aaPredicted RBP22.27■■□□□ 1.16
CCM2-211ENST00000478582 HIF1ANQ9NWT6 349 aa22.27■■□□□ 1.16
CCM2-211ENST00000478582 A0A087WXM4 84 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 GABRPO00591 440 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 ANGPTL7O43827 346 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 RGS9O75916 674 aaPredicted RBP22.26■■□□□ 1.15
CCM2-211ENST00000478582 INMTO95050 263 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 KNG1P01042 644 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 HNF1AP20823 631 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 ZNF93P35789 620 aaPredicted RBP22.26■■□□□ 1.15
CCM2-211ENST00000478582 NPBWR2P48146 333 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 LCN2P80188 198 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 C11orf91Q3C1V1 193 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 SYT6Q5T7P8 510 aaPredicted RBP22.26■■□□□ 1.15
CCM2-211ENST00000478582 ASCL4Q6XD76 172 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 SATL1Q86VE3 508 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 TSPAN14Q8NG11 270 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 SDSLQ96GA7 329 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 GAFA1Q96PS6 74 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 GPER1Q99527 375 aa22.26■■□□□ 1.15
CCM2-211ENST00000478582 MEGF11A6BM72 1044 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 MAGEA13PA6NCF6 341 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 NKX6-3A6NJ46 265 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 RFPL4AA6NLU0 287 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 RFPL4AL1F8VTS6 287 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 CCRL2O00421 344 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 SIGLEC5O15389 551 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 PHF1O43189 567 aaPredicted RBP22.25■■□□□ 1.15
CCM2-211ENST00000478582 TMEM225BP0DP42 221 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 BCL3P20749 454 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 PSMB9P28065 219 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 FABP5Q01469 135 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 CR1LQ2VPA4 569 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 FAM27D1Q5T7N8 215 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 CD200R1LQ6Q8B3 271 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 BATF2Q8N1L9 274 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 MDFIQ99750 246 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 PPIL3Q9H2H8 161 aaKnown RBP22.25■■□□□ 1.15
CCM2-211ENST00000478582 SMURF1Q9HCE7 757 aa22.25■■□□□ 1.15
CCM2-211ENST00000478582 DVL1O14640 695 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 FCN3O75636 299 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 MAS1P04201 325 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 SRMP19623 302 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 GALP22466 123 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 GATA3P23771 443 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 PRDX2P32119 198 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 PTGFRP43088 359 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 IL13RA1P78552 427 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 PAX2Q02962 417 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 HSD17B12Q53GQ0 312 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 LYPD6Q86Y78 171 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 FAM58AQ8N1B3 248 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 CD177Q8N6Q3 437 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 FAM216BQ8N7L0 139 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 NKAIN3Q8N8D7 197 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 NR1H4Q96RI1 486 aaPredicted RBP22.24■■□□□ 1.15
CCM2-211ENST00000478582 TCF7L1Q9HCS4 588 aa22.24■■□□□ 1.15
CCM2-211ENST00000478582 RBFOX1Q9NWB1 397 aaKnown RBP22.24■■□□□ 1.15
CCM2-211ENST00000478582 A0A1B0GW55 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 GPR37O15354 613 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 ARL6IP5O75915 188 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L2P0CJ85 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L3P0CJ86 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L4P0CJ87 422 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L5P0CJ88 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L6P0CJ89 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L7P0CJ90 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 GABRA2P47869 451 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 ELP2Q6IA86 826 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4L9Q6RFH8 374 aaPredicted RBP22.23■■□□□ 1.15
CCM2-211ENST00000478582 IL17RELQ6ZVW7 336 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 C1QL2Q7Z5L3 287 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 PNLDC1Q8NA58 520 aaKnown RBP22.23■■□□□ 1.15
CCM2-211ENST00000478582 TNFAIP8L1Q8WVP5 186 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 EMG1Q92979 244 aaKnown RBP22.23■■□□□ 1.15
CCM2-211ENST00000478582 DACT3Q96B18 629 aaPredicted RBP22.23■■□□□ 1.15
CCM2-211ENST00000478582 HMG20AQ9NP66 347 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 DUX4Q9UBX2 424 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 OR5V1Q9UGF6 321 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 MAB21L2Q9Y586 359 aa22.23■■□□□ 1.15
CCM2-211ENST00000478582 TRDV1A0A1B0GX56 115 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 TRIM64CA6NLI5 447 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 NDUFB3O43676 98 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 TFF1P04155 84 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 SFTPBP07988 381 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 SRD5A1P18405 259 aa22.22■■□□□ 1.15
CCM2-211ENST00000478582 ZNF146Q15072 292 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms