RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EMG1Q92979 244 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 GAFA1Q96PS6 74 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 GPER1Q99527 375 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NRIP2Q9BQI9 281 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 C7orf69Q9H7B7 122 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RBFOX1Q9NWB1 397 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM160Q9NX00 188 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 MTCH1Q9NZJ7 389 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 IL36RNQ9UBH0 155 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 CKLFQ9UBR5 152 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 LPAR3Q9UBY5 353 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 DSCAML1Q8TD84 2053 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 IGHV2-70DA0A0C4DH43 119 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 TRBV5-5A0A0J9YX44 114 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 MAGEA13PA6NCF6 341 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF879B4DU55 563 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NDUFB3O43676 98 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 FCN3O75636 299 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 AVPP01185 164 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 HOXB4P17483 251 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NDUFB7P17568 137 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 GATA3P23771 443 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NPBWR2P48146 333 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NPY4RP50391 375 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RIPPLY3P57055 190 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 GABARAPL2P60520 117 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 BDH1Q02338 343 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 PDZK1IP1Q13113 114 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 INSL4Q14641 139 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 KISS1Q15726 138 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 LRRC10Q5BKY1 277 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 DDI2Q5TDH0 399 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ASPHD2Q6ICH7 369 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 BTNL3Q6UXE8 466 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 BTN2A1Q7KYR7 527 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 MKXQ8IYA7 352 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ZNRF1Q8ND25 227 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 OR52N4Q8NGI2 321 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 UFD1Q92890 307 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 NUDT16L1Q9BRJ7 211 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 MRI1Q9BV20 369 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 TMPRSS13Q9BYE2 586 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ELL3Q9HB65 397 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RASL12Q9NYN1 266 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 SLC25A10Q9UBX3 287 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 KIAA2026Q5HYC2 2103 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TRAV8-7A0A075B6U6 113 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TNFRSF13BO14836 293 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 SIGLEC5O15389 551 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ENSAO43768 121 aaKnown RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 NOS1APO75052 506 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TPPPO94811 219 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 MAS1P04201 325 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ACAA1P09110 424 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM225BP0DP42 221 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 PRKACAP17612 351 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 AMY2BP19961 511 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 CPT2P23786 658 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ACSM1Q08AH1 577 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TBCEQ15813 527 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 DGUOKQ16854 277 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ARMCX4Q5H9R4 360 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 FIP1L1Q6UN15 594 aaKnown RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 C16orf54Q6UWD8 224 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF788Q6ZQV5 615 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 C1orf229Q6ZS94 237 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 Q8IYB0 196 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 CD177Q8N6Q3 437 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ASCC1Q8N9N2 400 aaKnown RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TNFAIP8L1Q8WVP5 186 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 RAB40AQ8WXH6 277 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM203Q969S6 136 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 CPNE2Q96FN4 548 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 MED30Q96HR3 178 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 DERL3Q96Q80 235 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 DNTTIP1Q9H147 329 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 HES4Q9HCC6 221 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 NOX4Q9NPH5 578 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 KAAG1Q9UBP8 84 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF222Q9UK12 451 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-215ENST00000478531 INSIG2Q9Y5U4 225 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 AUP1Q9Y679 476 aa5.72□□□□□ -1.49
BRCA1-215ENST00000478531 PPIAL4CA0A0B4J2A2 164 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 IGKV1-12A0A0C4DH73 117 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 A0A1W2PQ09 198 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 J3QLI3 93 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 GABRPO00591 440 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 RGS9O75916 674 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-215ENST00000478531 IGKV1D-12P01611 117 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 SFTPBP07988 381 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 FAM157CP0CG43 387 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-215ENST00000478531 DUSP1P28562 367 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 BDKRB2P30411 391 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 PRDX2P32119 198 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 OR3A4PP47883 348 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ERVK11-1P61568 191 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms