RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 HIST2H2BDQ6DRA6 164 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 KCTD18Q6PI47 426 aaPredicted RBP5.34□□□□□ -1.55
SH3D19-207ENST00000478503 MOB3CQ70IA8 216 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 BHLHA15Q7RTS1 189 aaPredicted RBP5.34□□□□□ -1.55
SH3D19-207ENST00000478503 MRPL21Q7Z2W9 205 aaKnown RBP5.34□□□□□ -1.55
SH3D19-207ENST00000478503 SMIM20Q8N5G0 67 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 OR52N4Q8NGI2 321 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 RHBDD1Q8TEB9 315 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 ABHD3Q8WU67 409 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 MRI1Q9BV20 369 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 DEFB126Q9BYW3 111 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 BANF2Q9H503 90 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 SLC2A9Q9NRM0 540 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 PRR13Q9NZ81 148 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 GLTPQ9NZD2 209 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 CKLFQ9UBR5 152 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 OR52A1Q9UKL2 312 aa5.34□□□□□ -1.55
SH3D19-207ENST00000478503 ZNF407Q9C0G0 2248 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 IGHV5-10-1A0A0J9YXX1 117 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ANKRD20A5PA0PJZ0 165 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 EIF4E2O60573 245 aaKnown RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 NPIPB7O75200 414 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 DXOO77932 396 aaKnown RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ITGB2P05107 769 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 HTR2CP28335 458 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CNN1P51911 297 aaKnown RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 UCP3P55916 312 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TCL1AP56279 114 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TNFRSF9Q07011 255 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 C4orf48Q5BLP8 95 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CD276Q5ZPR3 534 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TEX261Q6UWH6 196 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SPEM1Q8N4L4 309 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 OR52N5Q8NH56 324 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 FAM110DQ8TAY7 271 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CASTOR1Q8WTX7 329 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ADAT3Q96EY9 351 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ATG101Q9BSB4 218 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 U3KQ87 197 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TMEM131Q92545 1883 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 MEIKINA0A087WXM9 373 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 LDOC1O95751 146 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 MELTFP08582 738 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SULT1A3P0DMM9 295 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SULT1A4P0DMN0 295 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 PNLIPP16233 465 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 GNB3P16520 340 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 PI3P19957 117 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 H2BFSP57053 126 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 DCDP81605 110 aaKnown RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 NCOA6Q14686 2063 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CSRP2Q16527 193 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 LYSMD4Q5XG99 296 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TMEM144Q7Z5S9 345 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ZNF101Q8IZC7 436 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 COQ8AQ8NI60 647 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 RNF128Q8TEB7 428 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 MCHR2Q969V1 340 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ELL3Q9HB65 397 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 IL17BQ9UHF5 180 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 MGAQ8IWI9 3026 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 EML6Q6ZMW3 1958 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 DMXL1Q9Y485 3027 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 FTCDNL1E5RQL4 147 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 F5H5K5 113 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 G3V3Q6 166 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 M0R233 179 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CREBL2O60519 120 aaPredicted RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SLC22A5O76082 557 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ZNF205O95201 554 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CXCL2P19875 107 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 RFC3P40938 356 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SLC6A9P48067 706 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CLRN1P58418 232 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ISXQ2M1V0 245 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 CDNFQ49AH0 187 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 FFAR4Q5NUL3 377 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TMEM71Q6P5X7 295 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SPNS3Q6ZMD2 512 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 FAM222BQ8WU58 562 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SLAMF6Q96DU3 332 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 NICN1Q9BSH3 213 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 SELENOIQ9C0D9 397 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 G6PC2Q9NQR9 355 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 DKK4Q9UBT3 224 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 NDRG3Q9UGV2 375 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 NXT1Q9UKK6 140 aaKnown RBP5.33□□□□□ -1.56
SH3D19-207ENST00000478503 KCNMB2Q9Y691 235 aa5.33□□□□□ -1.56
SH3D19-207ENST00000478503 TRBV5-7A0A0A0MS05 114 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 CYB5BO43169 146 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 XRCC3O43542 346 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 SYT7O43581 403 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 OR2T1O43869 369 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 IFNA4P05014 189 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 PATE4P0C8F1 98 aa5.32□□□□□ -1.56
SH3D19-207ENST00000478503 PTGFRP43088 359 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms