RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 M0R129 80 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ARG1P05089 322 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 PIPP12273 146 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 CCL3L1P16619 93 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 BMXP51813 675 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ARHGDIBP52566 201 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ATP1B3P54709 279 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ACTC1P68032 377 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ACTA1P68133 377 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 EFNB1P98172 346 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 COL10A1Q03692 680 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ZNF273Q14593 569 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ARSJQ5FYB0 599 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 BCDIN3DQ7Z5W3 292 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 CATSPERDQ86XM0 798 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 OR4S1Q8NGB4 309 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 RORBQ92753 470 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 PPP1R14AQ96A00 147 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 MRPL48Q96GC5 212 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 TBX5Q99593 518 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 NKX3-1Q99801 234 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
SMARCE1-209ENST00000478349 A0A1W2PQL4 384 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 SNTNA6NMZ2 147 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 F2RL2O00254 374 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 MITFO75030 526 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 CIB2O75838 187 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 ZNF20P17024 532 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 PRKACBP22694 351 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 PEX2P28328 305 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 RBP2P50120 134 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 DYNC1I2Q13409 638 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 IL18R1Q13478 541 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 FAM189A2Q15884 450 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 ODF4Q2M2E3 257 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 SPIN3Q5JUX0 258 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 MINOS1Q5TGZ0 78 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 SLC25A26Q70HW3 274 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 EGFL6Q8IUX8 553 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 C17orf50Q8WW18 174 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 SNX22Q96L94 193 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 CIB1Q99828 191 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 GABARAPL3Q9BY60 117 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 IMPAD1Q9NX62 359 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 GNG8Q9UK08 70 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 TCF19Q9Y242 345 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 LINC00312Q9Y6C7 94 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 MINOS1-NBL1R4GNA1 71 aa11.72□□□□□ -0.53
SMARCE1-209ENST00000478349 NOTCH1P46531 2555 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 LOC107986453A0A1B0GWG9 222 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 FAM90A8PA6NJQ4 464 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 MAGEB4O15481 346 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 OPN1MWP04001 364 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 VSIG10L2P0DP72 767 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 GABRR1P24046 479 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 AZGP1P25311 298 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 TMEM244Q5VVB8 128 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 ZNF626Q68DY1 528 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 KCTD20Q7Z5Y7 419 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 CAPSLQ8WWF8 208 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 CFHR4Q92496 578 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 SLAMF9Q96A28 289 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 SPSB1Q96BD6 273 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 CENPNQ96H22 339 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 AKR1E2Q96JD6 320 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 PRSS22Q9GZN4 317 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 RIBC2Q9H4K1 309 aa11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-209ENST00000478349 TRBV2A0A0J9YWF9 115 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 A6NIN4 97 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 XPNPEP2O43895 674 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF737O75373 536 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 FBXO24O75426 580 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 HAND1O96004 215 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 EPHA2P29317 976 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 DYNLT3P51808 116 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 EMX1Q04741 257 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 BNIP1Q12981 228 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 GRK1Q15835 563 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 LHFPL2Q6ZUX7 228 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 REC114Q7Z4M0 266 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 TRAPPC6BQ86SZ2 158 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF676Q8N7Q3 588 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms