RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CPT2P23786 658 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 NPBWR2P48146 333 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ERVK11-1P61568 191 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 PPP3R1P63098 170 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 IL13RA1P78552 427 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 PAX2Q02962 417 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ACSM1Q08AH1 577 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 PDZK1IP1Q13113 114 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 KISS1Q15726 138 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 LIPKQ5VXJ0 399 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF529Q6P280 563 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 CRIP3Q6Q6R5 217 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 BTNL3Q6UXE8 466 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF788Q6ZQV5 615 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 C1orf229Q6ZS94 237 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 BTN2A1Q7KYR7 527 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 SATL1Q86VE3 508 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 CD177Q8N6Q3 437 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ZNRF1Q8ND25 227 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM185AQ8NFB2 350 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 OR52N4Q8NGI2 321 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 RAB40AQ8WXH6 277 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 UFD1Q92890 307 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 EMG1Q92979 244 aaKnown RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ELL3Q9HB65 397 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 HES4Q9HCC6 221 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 RASL12Q9NYN1 266 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 IL36RNQ9UBH0 155 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 KAAG1Q9UBP8 84 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 LPAR3Q9UBY5 353 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 OPN4Q9UHM6 478 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF222Q9UK12 451 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 INSIG2Q9Y5U4 225 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 TRBV5-7A0A0A0MS05 114 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 PPIAL4CA0A0B4J2A2 164 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF879B4DU55 563 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 GABRPO00591 440 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 PIN1P1O15428 100 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 MAGEB3O15480 346 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NDUFB3O43676 98 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 CYB5AP00167 134 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 KNG1P01042 644 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 CD1AP06126 327 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 ACAA1P09110 424 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM225BP0DP42 221 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NDUFB7P17568 137 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 PRKACAP17612 351 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 GATA3P23771 443 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 DUSP1P28562 367 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NPY4RP50391 375 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 CAPZA1P52907 286 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 GABARAPL2P60520 117 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 ZP1P60852 638 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 TBCEQ15813 527 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 LRRC10Q5BKY1 277 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 ATPAF1Q5TC12 328 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 DDI2Q5TDH0 399 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 MKXQ8IYA7 352 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 H1FXQ92522 213 aaKnown RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM203Q969S6 136 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 DACT3Q96B18 629 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 DERL3Q96Q80 235 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 GPER1Q99527 375 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NUDT16L1Q9BRJ7 211 aaKnown RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 MRI1Q9BV20 369 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 FAM192AQ9GZU8 254 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NOX4Q9NPH5 578 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-222ENST00000478095 MAB21L2Q9Y586 359 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 AUP1Q9Y679 476 aa8.51□□□□□ -1.05
HDAC6-222ENST00000478095 NF1P21359 2839 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 J3QLI3 93 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ENSAO43768 121 aaKnown RBP8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ALX3O95076 343 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 MAS1P04201 325 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 SFTPBP07988 381 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 FAM157CP0CG43 387 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 IGFBP3P17936 291 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-222ENST00000478095 FSTP19883 344 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 BDKRB2P30411 391 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 PRDX2P32119 198 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 OR3A4PP47883 348 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 RPS25P62851 125 aaKnown RBP8.5□□□□□ -1.05
HDAC6-222ENST00000478095 MLLT11Q13015 90 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ACSM3Q53FZ2 586 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 FAM27D1Q5T7N8 215 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 CD276Q5ZPR3 534 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF367Q7RTV3 350 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 PRIMA1Q86XR5 153 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ASCC1Q8N9N2 400 aaKnown RBP8.5□□□□□ -1.05
HDAC6-222ENST00000478095 TNFAIP8L1Q8WVP5 186 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 SDSLQ96GA7 329 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 MED30Q96HR3 178 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms