RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 A0A1W2PRM7 423 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 OR6C6A6NF89 314 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 TMEM212A6NML5 194 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 H3BMQ9 156 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 OGG1O15527 345 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 APOC1P02654 83 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 ANXA2P07355 339 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 UBCP0CG48 685 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 LYL1P12980 280 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 LMO1P25800 156 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 NPY4RP50391 375 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 NANOS3P60323 173 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 PSG4Q00888 419 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 EGFEM1PQ0D2K5 195 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 ALKBH1Q13686 389 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 WDR38Q5JTN6 314 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 FDX2Q6P4F2 183 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 SLC16A12Q6ZSM3 486 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 ALDH16A1Q8IZ83 802 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 C19orf18Q8NEA5 215 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 OR2G2Q8NGZ5 317 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 RPL3LQ92901 407 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 TMEM203Q969S6 136 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 RCC1LQ96I51 464 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 PGLYRP3Q96LB9 341 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 KCNJ15Q99712 375 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 NAA50Q9GZZ1 169 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 WNT5BQ9H1J7 359 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 POFUT1Q9H488 388 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 EXOSC4Q9NPD3 245 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 FAM206AQ9NX38 181 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 SSR3Q9UNL2 185 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 SIRT4Q9Y6E7 314 aaPredicted RBP7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 LOC107986453A0A1B0GWG9 222 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 A0A1W2PRX2 142 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 LRRC30A6NM36 301 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 H3BUX3 64 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 M0R135 149 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 SLC22A1O15245 554 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 SRSF10O75494 262 aaKnown RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 ZFPL1O95159 310 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 PAHP00439 452 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 SERPINA3P01011 423 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 HLA-DPB1P04440 258 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 CD1AP06126 327 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 PF4V1P10720 104 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 GALP22466 123 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 KIR3DL2P43630 455 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 CCR9P51686 369 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 PRKXP51817 358 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 TPTEP56180 551 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF121P58317 390 aaPredicted RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 LY6EQ16553 131 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 CTF1Q16619 201 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 YIF1BQ5BJH7 314 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 DRAM2Q6UX65 266 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 VMO1Q7Z5L0 202 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 MOGAT3Q86VF5 341 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 COMMD2Q86X83 199 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 CATSPERDQ86XM0 798 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 C1orf87Q8N0U7 546 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 PRSS35Q8N3Z0 413 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 MS4A15Q8N5U1 240 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 OR10AD1Q8NGE0 317 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 OR5AK2Q8NH90 309 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 NPRL2Q8WTW4 380 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 THRSPQ92748 146 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 GHSRQ92847 366 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 RNF166Q96A37 237 aaPredicted RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 C12orf43Q96C57 262 aaKnown RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 DGCR14Q96DF8 476 aaKnown RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF799Q96GE5 643 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 ASCL2Q99929 193 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 PDCD1LG2Q9BQ51 273 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 OR51E2Q9H255 320 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 RANBP3Q9H6Z4 567 aaPredicted RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 BRD7Q9NPI1 651 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 FRRS1LQ9P0K9 344 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 CTSZQ9UBR2 303 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 NUFIP1Q9UHK0 495 aaKnown RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 OR52A1Q9UKL2 312 aa7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 SF3B6Q9Y3B4 125 aaKnown RBP7.92□□□□□ -1.14
SMARCB1-206ENST00000477836 OR4C45A6NMZ5 311 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 F5H5K5 113 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 GABRPO00591 440 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 GPX5O75715 221 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 DUS4LO95620 317 aaKnown RBP7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 FSTL3O95633 263 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 PF4P02776 101 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 DBHP09172 617 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 COX5BP10606 129 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 SLC2A1P11166 492 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 KITLGP21583 273 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 MAPK3P27361 379 aaPredicted RBP7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 OTX1P32242 354 aaPredicted RBP7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 VBP1P61758 197 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 NCS1P62166 190 aa7.91□□□□□ -1.14
SMARCB1-206ENST00000477836 LSM3P62310 102 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms