RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 OR52J3Q8NH60 311 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 H1FXQ92522 213 aaKnown RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RPL3LQ92901 407 aaKnown RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 SGK3Q96BR1 496 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 DUS3LQ96G46 650 aaKnown RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RAB3IPQ96QF0 476 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 OR5M11Q96RB7 305 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 AMELYQ99218 206 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 CDCA4Q9BXL8 241 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 SLC22A4Q9H015 551 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 OR52D1Q9H346 318 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 ANKRD19PQ9H560 264 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RABEP2Q9H5N1 569 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RANBP3Q9H6Z4 567 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 SP140LQ9H930 580 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RNPEPL1Q9HAU8 725 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 SAR1AQ9NR31 198 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 C19orf12Q9NSK7 152 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 ARL8BQ9NVJ2 186 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 HAO2Q9NYQ3 351 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 STEAP1Q9UHE8 339 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF391Q9UJN7 358 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF222Q9UK12 451 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 UBE2J1Q9Y385 318 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-207ENST00000477676 RHBDD3Q9Y3P4 386 aa3.66□□□□□ -1.82
CKS1B-207ENST00000477676 A0A0G2JND7 137 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 A6NDX4 124 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 BTBD17A6NE02 478 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PGPEP1LA6NFU8 196 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 M0R1W7 72 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SIGLEC5O15389 551 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 NDUFB3O43676 98 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 ANGPTL7O43827 346 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 RHBDL1O75783 438 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PAHP00439 452 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SERPINA1P01009 418 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 NPPAP01160 153 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 IFNA14P01570 189 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SEMG1P04279 462 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 GYPBP06028 91 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 H1F0P07305 194 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 ACAA1P09110 424 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CLUP10909 449 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PSG2P11465 335 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 EEF1B2P24534 225 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 HOXD3P31249 432 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PCP4P48539 62 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 GSSP48637 474 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 GSK3BP49841 420 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 RPS6KA3P51812 740 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 DLX6P56179 175 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CAV3P56539 151 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 TIRAPP58753 221 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 LIPEQ05469 1076 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 EGFEM1PQ0D2K5 195 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 AANATQ16613 207 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 FAM76BQ5HYJ3 339 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 COQ5Q5HYK3 327 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 DMRTC1Q5HYR2 192 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 FGD3Q5JSP0 725 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 LINC01590Q5TEZ4 76 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 DRAM2Q6UX65 266 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SLC36A1Q7Z2H8 476 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 DCXRQ7Z4W1 244 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 ZDHHC21Q8IVQ6 265 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CD177Q8N6Q3 437 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SPERTQ8NA61 448 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PAPD5Q8NDF8 572 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 OR8D4Q8NGM9 314 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 OR9Q1Q8NGQ5 310 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 OR2T6Q8NHC8 308 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 FANK1Q8TC84 345 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 HPSE2Q8WWQ2 592 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 C12orf43Q96C57 262 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 RCN3Q96D15 328 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 NKX3-1Q99801 234 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CHCHD6Q9BRQ6 235 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CCDC134Q9H6E4 229 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 METTL8Q9H825 291 aaKnown RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 INPP5EQ9NRR6 644 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 ARGLU1Q9NWB6 273 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 PPP1R14DQ9NXH3 145 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 SLC25A10Q9UBX3 287 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 TMEM5Q9Y2B1 443 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 CAB39Q9Y376 341 aaPredicted RBP3.65□□□□□ -1.83
CKS1B-207ENST00000477676 N6AMT1Q9Y5N5 214 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 COMMD3-BMI1R4GMX3 469 aa3.65□□□□□ -1.83
CKS1B-207ENST00000477676 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 A0A1W2PPH5 198 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 DHRS12A0PJE2 317 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 MEX3AA1L020 520 aaKnown RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM90A18PA6NE21 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM90A16PA6NEW6 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM90A9PA6NNJ1 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 VGLL3A8MV65 326 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms