RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 DTYMKP23919 212 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 MMP26Q9NRE1 261 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 ATP6V1G2-DDX39BF2Z307 99 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 GEMIN2O14893 280 aaKnown RBP12.83□□□□□ -0.36
HDAC6-220ENST00000477528 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 HES3Q5TGS1 186 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 MOB1BQ7L9L4 216 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 H2BFWTQ7Z2G1 175 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 TMEM100Q9NV29 134 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 MPC1Q9Y5U8 109 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 RAB19A4D1S5 217 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 COX6A1P12074 109 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 NKX6-1P78426 367 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-220ENST00000477528 VASH2Q86V25 355 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 CLDN23Q96B33 292 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 WDR13Q9H1Z4 485 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 SH3BGRL2Q9UJC5 107 aa12.83□□□□□ -0.36
HDAC6-220ENST00000477528 IFNA10P01566 189 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 MAGEA5P43359 124 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 RPS23P62266 143 aaKnown RBP12.82□□□□□ -0.36
HDAC6-220ENST00000477528 PJVKQ0ZLH3 352 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 OR2A2Q6IF42 318 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 TNFSF18Q9UNG2 199 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ERVH48-1M5A8F1 160 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 IL2RAP01589 272 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 CA6P23280 308 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 DEFB109BQ30KR1 87 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 BPIFCQ8NFQ6 507 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 NTNG2Q96CW9 530 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ZNF250P15622 560 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ZXDAP98168 799 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 PRR13Q9NZ81 148 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 GBF1Q92538 1859 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ACTL6AO96019 429 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 RBPJQ06330 500 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-220ENST00000477528 BVESQ8NE79 360 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 ADAT1Q9BUB4 502 aaKnown RBP12.82□□□□□ -0.36
HDAC6-220ENST00000477528 SLC26A1Q9H2B4 701 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 STARD10Q9Y365 291 aa12.82□□□□□ -0.36
HDAC6-220ENST00000477528 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 M0R296 226 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 CALCRP30988 508 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 FABP6P51161 128 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 C14orf79Q96F83 325 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 NUDT16L1Q9BRJ7 211 aaKnown RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 R4GN57 208 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 UMAD1C9J7I0 102 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 CRYAAP02489 173 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 S100A12P80511 92 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 MRPL41Q8IXM3 137 aaKnown RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 ZNF808Q8N4W9 903 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 PFDN5Q99471 154 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 RNF150Q9ULK6 438 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 A0A1W2PP11 408 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 FLI1Q01543 452 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 IL13RA2Q14627 380 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 OR8B8Q15620 311 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 DCAF10Q5QP82 559 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 PURGQ9UJV8 347 aaKnown RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 PRSS44E7EML9 344 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 RNASEK-C17orf49H0YIS7 233 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 ZFP62Q8NB50 900 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 LINC00052Q96N35 136 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 HEYLQ9NQ87 328 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-220ENST00000477528 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
HDAC6-220ENST00000477528 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 ZNF724A8MTY0 619 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 ZBTB25P24278 435 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 HOXA1P49639 335 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-220ENST00000477528 TMEM211Q6ICI0 200 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 NUFIP2Q7Z417 695 aaKnown RBP12.8□□□□□ -0.36
HDAC6-220ENST00000477528 NFAM1Q8NET5 270 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-220ENST00000477528 SHARPINQ9H0F6 387 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 CD74P04233 296 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 PRF1P14222 555 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 HNF4GQ14541 408 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 ZNF574Q6ZN55 896 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-220ENST00000477528 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 MALSU1Q96EH3 234 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 NPIPB7O75200 414 aa12.8□□□□□ -0.36
HDAC6-220ENST00000477528 TAGLN2P37802 199 aaKnown RBP12.8□□□□□ -0.36
HDAC6-220ENST00000477528 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms