RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DEDD2Q8WXF8 326 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SLC7A6Q92536 515 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NEIL2Q969S2 332 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 APH1AQ96BI3 265 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RAB39BQ96DA2 213 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CCDC126Q96EE4 140 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SMARCD1Q96GM5 515 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 REEP6Q96HR9 211 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 KCTD7Q96MP8 289 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 GUCD1Q96NT3 240 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 GPR82Q96P67 336 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 FMO2Q99518 471 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TAPBPLQ9BX59 468 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NKX6-2Q9C056 277 aaPredicted RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 TMEM39BQ9GZU3 492 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SLC25A51Q9H1U9 297 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 DPAGT1Q9H3H5 408 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NANOGQ9H9S0 305 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 FAM49BQ9NUQ9 324 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 DCAF13Q9NV06 445 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 MED29Q9NX70 200 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SLC25A37Q9NYZ2 338 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 FLRT3Q9NZU0 649 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 GNG12Q9UBI6 72 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 LHX3Q9UBR4 397 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PRODH2Q9UF12 536 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RAB22AQ9UL26 194 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.02□□□□□ -2.09
XRN1-211ENST00000477237 ECM29Q5VYK3 1845 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TARBP1Q13395 1621 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 ZCCHC11Q5TAX3 1644 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 BIVM-ERCC5R4GMW8 1640 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 HECW2Q9P2P5 1572 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NFASCO94856 1347 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 KNDC1Q76NI1 1749 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 MYO5CQ9NQX4 1742 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 A0A0G2JN53 185 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 KIR2DS1A0A191URI9 304 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 EXOC1LA0A1B0GW35 172 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR2M5A3KFT3 312 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ANKUB1A6NFN9 424 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ARL5CA6NH57 179 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CASTOR2A6NHX0 329 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR5H1A6NKK0 313 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FAM159BA6NKW6 160 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 A8MVM7 634 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C1orf196B1AJZ1 125 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 EPM2AB3EWF7 344 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SRRM5B3KS81 715 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 E5RGE8 158 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 G3V4G9 280 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 H3BMQ9 156 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 AIPO00170 330 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 UPK1AO00322 258 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SLC1A7O00341 560 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CHEK1O14757 476 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CASKO14936 926 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ATP6V0E1O15342 81 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 PRKAB2O43741 272 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SYNGR1O43759 233 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GNG7O60262 68 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SNX3O60493 162 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SLC16A7O60669 478 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ICOSLGO75144 302 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FKBP6O75344 327 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ENTPD6O75354 484 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FOXH1O75593 365 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CNMDO75829 334 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 H1F0P07305 194 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 SFTPBP07988 381 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 TACSTD2P09758 323 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ADORA3P0DMS8 318 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR5H8P0DN80 308 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ACP2P11117 423 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 VPREB1P12018 145 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 HLA-EP13747 358 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 UGT2B7P16662 529 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 RCC1P18754 421 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 HIST1H1TP22492 207 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 SLC2A5P22732 501 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 HRH2P25021 359 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GABRA5P31644 462 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 HSD17B3P37058 310 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OPRL1P41146 370 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 TNFSF9P41273 254 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 KIR2DS4P43632 304 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 RPL21P46778 160 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 P2RY1P47900 373 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 STC1P52823 247 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GEMP55040 296 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 XGP55808 180 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 DLX6P56179 175 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CLDN15P56746 228 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 TCTAP57738 103 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FKBP1BP68106 108 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 RHOGP84095 191 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CDKL1Q00532 357 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OC90Q02509 493 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 GNA12Q03113 381 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 PRKCDQ05655 676 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms