RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 UTP4Q969X6 686 aaKnown RBP10.54□□□□□ -0.72
MRPL55-228ENST00000476267 PHF21AQ96BD5 680 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 MNTQ99583 582 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 TEX12Q9BXU0 123 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 SEBOXQ9HB31 216 aaPredicted RBP10.54□□□□□ -0.72
MRPL55-228ENST00000476267 NECAP2Q9NVZ3 263 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
MRPL55-228ENST00000476267 CLN6Q9NWW5 311 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 SNX5Q9Y5X3 404 aa10.54□□□□□ -0.72
MRPL55-228ENST00000476267 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
MRPL55-228ENST00000476267 FAM90A22PA8MWA6 464 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 FAM107AO95990 144 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 CHRM2P08172 466 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 EPHA2P29317 976 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 ESRRGP62508 458 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-228ENST00000476267 SLX4IPQ5VYV7 408 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 C12orf73Q69YU5 71 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 CATSPERDQ86XM0 798 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 ASCC1Q8N9N2 400 aaKnown RBP10.53□□□□□ -0.72
MRPL55-228ENST00000476267 OR4S1Q8NGB4 309 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 TRMT10AQ8TBZ6 339 aaKnown RBP10.53□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 OCSTAMPQ9BR26 566 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 CADM1Q9BY67 442 aaKnown RBP10.53□□□□□ -0.72
MRPL55-228ENST00000476267 PRSS22Q9GZN4 317 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 PITPNC1Q9UKF7 332 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 GTF2A1LQ9UNN4 478 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 COL7A1Q02388 2944 aa10.53□□□□□ -0.72
MRPL55-228ENST00000476267 ZAR1LA6NP61 321 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 CD83Q01151 205 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-228ENST00000476267 FLOT2Q14254 428 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 CCDC197Q8NCU1 140 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 OR4F17Q8NGA8 305 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 OR52N4Q8NGI2 321 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 TMEM163Q8TC26 289 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 MRAPQ8TCY5 172 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-228ENST00000476267 R3HDM4Q96D70 268 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 SNX22Q96L94 193 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 CEP19Q96LK0 163 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 OR4F4Q96R69 305 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 CHST5Q9GZS9 411 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 ABCB10Q9NRK6 738 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 IL36RNQ9UBH0 155 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 POMPQ9Y244 141 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.73
MRPL55-228ENST00000476267 IGHV2-26A0A0B4J1V2 119 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 FAM230AA0A1W2PPH8 454 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ZNF670-ZNF695F2Z2N8 137 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 PSPNO60542 156 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 MITFO75030 526 aaPredicted RBP10.51□□□□□ -0.73
MRPL55-228ENST00000476267 IGHA1P01876 353 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 EDDM3BP56851 147 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 LOXL3P58215 753 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ACTR3P61158 418 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ISL1P61371 349 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ACTA2P62736 377 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ACTG2P63267 376 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ACTC1P68032 377 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 ACTA1P68133 377 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 TCTEX1D4Q5JR98 221 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 SPATA24Q86W54 205 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 TCEANCQ8N8B7 351 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 OR4P4Q8NGL7 312 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 SLAMF9Q96A28 289 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 SLC7A6OSQ96CW6 309 aaPredicted RBP10.51□□□□□ -0.73
MRPL55-228ENST00000476267 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.51□□□□□ -0.73
MRPL55-228ENST00000476267 LINC00312Q9Y6C7 94 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 SESN1Q9Y6P5 492 aa10.51□□□□□ -0.73
MRPL55-228ENST00000476267 MMP23AO75900 390 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 ALX3O95076 343 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 AZGP1P25311 298 aaKnown RBP10.5□□□□□ -0.73
MRPL55-228ENST00000476267 FUT6P51993 359 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 ZNF91Q05481 1191 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 KDM4DQ6B0I6 523 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 PRSS35Q8N3Z0 413 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 OR5M11Q96RB7 305 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 PRRG3Q9BZD7 231 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 TMEM133Q9H2Q1 129 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 HILPDAQ9Y5L2 63 aa10.5□□□□□ -0.73
MRPL55-228ENST00000476267 IGKV1-9A0A0C4DH69 117 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 A0A1W2PQL4 384 aaPredicted RBP10.49□□□□□ -0.73
MRPL55-228ENST00000476267 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 F2RL2O00254 374 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 SYT7O43581 403 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 RPP14O95059 124 aaKnown RBP10.49□□□□□ -0.73
MRPL55-228ENST00000476267 HAND1O96004 215 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 VDAC2P45880 294 aaPredicted RBP10.49□□□□□ -0.73
MRPL55-228ENST00000476267 NPBWR2P48146 333 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 OR12D2P58182 307 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 DYNC1I2Q13409 638 aaKnown RBP10.49□□□□□ -0.73
MRPL55-228ENST00000476267 EDDM3AQ14507 147 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms