RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 A0A1W2PRD5 423 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 A0A1W2PRF3 423 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 A0A1W2PRM7 423 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 HAX1O00165 279 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 CASQ2O14958 399 aaPredicted RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 TK1P04183 234 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 PRKACBP22694 351 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 NPBWR2P48146 333 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 POU3F4P49335 361 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 GBX2P52951 348 aaPredicted RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 RPL31P62899 125 aaKnown RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 COL10A1Q03692 680 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 MRPL28Q13084 256 aaKnown RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 XAF1Q6GPH4 301 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 C16orf87Q6PH81 154 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 CRIP3Q6Q6R5 217 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 PNKDQ8N490 385 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 OR13C9Q8NGT0 318 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 RFT1Q96AA3 541 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 SPSB1Q96BD6 273 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 OPALINQ96PE5 141 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 SPACA5Q96QH8 159 aa17.33■□□□□ 0.36
LIME1-204ENST00000476183 METTL8Q9H825 291 aaKnown RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 UNKLQ9H9P5 680 aaKnown RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 RBFOX1Q9NWB1 397 aaKnown RBP17.33■□□□□ 0.36
LIME1-204ENST00000476183 TMEM212A6NML5 194 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 K7N7A8 449 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 SPRY1O43609 319 aaPredicted RBP17.32■□□□□ 0.36
LIME1-204ENST00000476183 ZNF737O75373 536 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 BCL3P20749 454 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 DCKP27707 260 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 OR2G6Q5TZ20 316 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 TMEM200BQ69YZ2 307 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 HCP5Q6MZN7 132 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 LHFPL2Q6ZUX7 228 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 OR5AK2Q8NH90 309 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 RGP1Q92546 391 aaPredicted RBP17.32■□□□□ 0.36
LIME1-204ENST00000476183 EMG1Q92979 244 aaKnown RBP17.32■□□□□ 0.36
LIME1-204ENST00000476183 FAM234AQ9H0X4 552 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 ZCCHC4Q9H5U6 513 aa17.32■□□□□ 0.36
LIME1-204ENST00000476183 IGKV1-12A0A0C4DH73 117 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 NPFFO15130 113 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 IGKV1D-12P01611 117 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 MT-ND2P03891 347 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 GNAO1P09471 354 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 CCDC159P0C7I6 412 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 GUCA2AQ02747 115 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 PDZK1IP1Q13113 114 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 ZNF273Q14593 569 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 MKXQ8IYA7 352 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 C11orf42Q8N5U0 333 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 TMEM86BQ8N661 226 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 C3orf56Q8N813 242 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 ASCC1Q8N9N2 400 aaKnown RBP17.31■□□□□ 0.36
LIME1-204ENST00000476183 SETD9Q8NE22 299 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 CHIAQ9BZP6 476 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 COMMD4Q9H0A8 199 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 DSCAML1Q8TD84 2053 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 NBEAL1Q6ZS30 2694 aa17.31■□□□□ 0.36
LIME1-204ENST00000476183 TRBV2A0A0J9YWF9 115 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 TMEM82A0PJX8 343 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 H0YAE9 185 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 ANGPTL7O43827 346 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 IGHV4-59P01825 116 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 CHRM2P08172 466 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 CALCBP10092 127 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 CCL3L1P16619 93 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 CAPGP40121 348 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 UBE2E1P51965 193 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 ERVFRD-1P60508 538 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 FOXL1Q12952 345 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 BLMHQ13867 455 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 NCR3LG1Q68D85 454 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 LAIR2Q6ISS4 152 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 LDLRAD3Q86YD5 345 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 Q8IYB0 196 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 PARP16Q8N5Y8 322 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 RPS4Y2Q8TD47 263 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 CLEC2DQ9UHP7 191 aa17.3■□□□□ 0.36
LIME1-204ENST00000476183 DIMT1Q9UNQ2 313 aaKnown RBP17.3■□□□□ 0.36
LIME1-204ENST00000476183 CAB39Q9Y376 341 aaPredicted RBP17.3■□□□□ 0.36
LIME1-204ENST00000476183 SIRT4Q9Y6E7 314 aaPredicted RBP17.3■□□□□ 0.36
LIME1-204ENST00000476183 FAM181BA6NEQ2 426 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 HAND1O96004 215 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 PIPP12273 146 aaPredicted RBP17.29■□□□□ 0.36
LIME1-204ENST00000476183 EEF1B2P24534 225 aaKnown RBP17.29■□□□□ 0.36
LIME1-204ENST00000476183 DUSP1P28562 367 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 IER3P46695 156 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 IL18R1Q13478 541 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 CDK5R1Q15078 307 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 FIP1L1Q6UN15 594 aaKnown RBP17.29■□□□□ 0.36
LIME1-204ENST00000476183 C17orf107Q6ZR85 190 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 FAM58AQ8N1B3 248 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 OR5D18Q8NGL1 313 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 HAVCR2Q8TDQ0 301 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 SSMEM1Q8WWF3 244 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 GGHQ92820 318 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 NKX1-2Q9UD57 310 aaPredicted RBP17.29■□□□□ 0.36
LIME1-204ENST00000476183 DHDHQ9UQ10 334 aa17.29■□□□□ 0.36
LIME1-204ENST00000476183 POMT1Q9Y6A1 747 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms