RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 SULT1C4O75897 302 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CHRM2P08172 466 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 RAB13P51153 203 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 COL10A1Q03692 680 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 GID4Q8IVV7 300 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 PRSS35Q8N3Z0 413 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 DTX3Q8N9I9 347 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 IL4I1Q96RQ9 567 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 PRRG3Q9BZD7 231 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 NPFFR1Q9GZQ6 430 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 WNT10AQ9GZT5 417 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 KRT84Q9NSB2 600 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 H2AFY2Q9P0M6 372 aaPredicted RBP9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR14J1Q9UGF5 321 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 WARS2Q9UGM6 360 aaKnown RBP9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 A0A1W2PQL4 384 aaPredicted RBP9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 TMEM82A0PJX8 343 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FAM90A22PA8MWA6 464 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 G3V2T6 193 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR2T7P0C7T2 308 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 IGHV1-8P0DP01 117 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 COX7A1P24310 79 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 HTR1FP30939 366 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 POLR2IP36954 125 aaKnown RBP9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FUT6P51993 359 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 LGALS4P56470 323 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 MEF2CQ06413 473 aaPredicted RBP9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FBLN7Q53RD9 439 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF782Q6ZMW2 699 aaPredicted RBP9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR8H2Q8N162 312 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 BATF2Q8N1L9 274 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CCDC54Q8NEL0 328 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 C10orf35Q96D05 121 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SNX22Q96L94 193 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CHST5Q9GZS9 411 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ENOPH1Q9UHY7 261 aa9.87□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 IGKV1-9A0A0C4DH69 117 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 METTL15A6NJ78 407 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 E9PQ18 207 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 RPP14O95059 124 aaKnown RBP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 PIPP12273 146 aaPredicted RBP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 TMED1Q13445 227 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 HABP2Q14520 560 aaPredicted RBP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF146Q15072 292 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CNN3Q15417 329 aaKnown RBP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 Q6ZS46 218 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZDHHC13Q8IUH4 622 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 YIPF7Q8N8F6 280 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 C11orf44Q8N8P7 122 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 DNAAF1Q8NEP3 725 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR52N4Q8NGI2 321 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR13D1Q8NGV5 346 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 TRMT10AQ8TBZ6 339 aaKnown RBP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OSBPL10Q9BXB5 764 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 GTF2A1LQ9UNN4 478 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SLC7A11Q9UPY5 501 aa9.86□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FAM230AA0A1W2PPH8 454 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 J3QRE1 110 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SYT7O43581 403 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 PSPNO60542 156 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 IGHA1P01876 353 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ARG1P05089 322 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 KRT8P05787 483 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 VSIG10L2P0DP72 767 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ERP29P30040 261 aaKnown RBP9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 NPBWR2P48146 333 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF85Q03923 595 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF91Q05481 1191 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SSX2Q16385 188 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 MINOS1Q5TGZ0 78 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ASCC1Q8N9N2 400 aaKnown RBP9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 RPS4Y2Q8TD47 263 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SLAMF9Q96A28 289 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 EME1Q96AY2 570 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FOXRED1Q96CU9 486 aaPredicted RBP9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CENPNQ96H22 339 aaPredicted RBP9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CIB1Q99828 191 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 GABARAPL3Q9BY60 117 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 IL36RNQ9UBH0 155 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 LINC00312Q9Y6C7 94 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 MINOS1-NBL1R4GNA1 71 aa9.85□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 GATBO75879 557 aaKnown RBP9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 MMP23AO75900 390 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 CD28P10747 220 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 JUNBP17275 347 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 BLCAPP62952 87 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 EMX1Q04741 257 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FAM189A2Q15884 450 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ODF4Q2M2E3 257 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FDX2Q6P4F2 183 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 Q6ZPA2 131 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 SLC25A26Q70HW3 274 aa9.84□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 UTS2BQ765I0 119 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms