RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ARRDC5A6NEK1 342 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 C9JQL5 133 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 F5H697 171 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 PIRO00625 290 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 HSD17B6O14756 317 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 GEMIN2O14893 280 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 RCBTB2O95199 551 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 DUS4LO95620 317 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 HBZP02008 142 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 GBAP04062 536 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 PGA4P0DJD7 388 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 PGA5P0DJD9 388 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ELAVL4P26378 380 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 HTR1FP30939 366 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 MDH2P40926 338 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 GNG4P50150 75 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TIRAPP58753 221 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 SNRPFP62306 86 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 MRPS34P82930 218 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 DGCR2P98153 550 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 RGNQ15493 299 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 SRSF7Q16629 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 CCL15Q16663 113 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ANKRD55Q3KP44 614 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TRMT12Q53H54 448 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 SOHLH1Q5JUK2 328 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 FAM102AQ5T9C2 384 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 AADACL3Q5VUY0 350 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 C1QL3Q5VWW1 255 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC27A1Q6PCB7 646 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 UNQ5815/PRO19632Q6UWF5 114 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TOMM20LQ6UXN7 152 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 C15orf39Q6ZRI6 1047 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 NEGR1Q7Z3B1 354 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 COMMD6Q7Z4G1 85 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 RNF175Q8N4F7 328 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ARIH2OSQ8N7S6 290 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TCEANCQ8N8B7 351 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TSTD1Q8NFU3 115 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TMED6Q8WW62 240 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 GEMIN6Q8WXD5 167 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 PSMF1Q92530 271 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TBX5Q99593 518 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ABHD14AQ9BUJ0 271 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC25A51Q9H1U9 297 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TXNIPQ9H3M7 391 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 C1orf198Q9H425 327 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 RHOJQ9H4E5 214 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 LYRM4Q9HD34 91 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 INPP5EQ9NRR6 644 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 BEX4Q9NWD9 120 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ALKBH4Q9NXW9 302 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 PTGFRNQ9P2B2 879 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 ERG28Q9UKR5 140 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 MMP17Q9ULZ9 603 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 FIS1Q9Y3D6 152 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 RFNGQ9Y644 331 aa5.23□□□□□ -1.57
ECHDC1-215ENST00000475319 TRBV6-7A0A0A0MS04 114 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TRAV38-1A0A0B4J264 116 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 A0A1W2PR80 420 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 NPEPPSL1A6NEC2 478 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TLCD2A6NGC4 264 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SERINC4A6NH21 518 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZAR1LA6NP61 321 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 LATO43561 262 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 FCMRO60667 390 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 UTS2O95399 124 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM50AO95807 157 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 IGKV5-2P06315 115 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 IL3P08700 152 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ERGP11308 486 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 CTSEP14091 401 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TNFRSF1AP19438 455 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 GPD1P21695 349 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZFP36L2P47974 494 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 THBS3P49746 956 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SNU13P55769 128 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 MTPNP58546 118 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 RAB10P61026 200 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 DYNLT1P63172 113 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 HSD52Q0P140 79 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM267Q0VDI3 215 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 PNRC1Q12796 327 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZP4Q12836 540 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 PPP1R8Q12972 351 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 GABRA6Q16445 453 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 HIST3H3Q16695 136 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF766Q5HY98 468 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC25A30Q5SVS4 291 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SFRP4Q6FHJ7 346 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ASCL4Q6XD76 172 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 Q6ZN92 141 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 MEPCEQ7L2J0 689 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 FA2HQ7L5A8 372 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 CPEB2Q7Z5Q1 589 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 CALHM3Q86XJ0 350 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 LAS2Q8IYD9 372 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms