RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 Q6ZTK2 550 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 LYPD6Q86Y78 171 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 Q8N402 240 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 DTX3Q8N9I9 347 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 TMEM104Q8NE00 496 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 FCAMRQ8WWV6 532 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 CXorf56Q9H5V9 222 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 IFT46Q9NQC8 304 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 RBFOX1Q9NWB1 397 aaKnown RBP8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 RASL12Q9NYN1 266 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 RNF7Q9UBF6 113 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 OR14J1Q9UGF5 321 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 EDARQ9UNE0 448 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 LAMP3Q9UQV4 416 aa8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF462Q96JM2 2506 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 A0A0G2JMP0 313 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 A0A0X1KG70 313 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 A0A1B0GWJ7 208 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 A0A1W2PP11 408 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 NKX6-3A6NJ46 265 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 J3QRK9 145 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 DEGS1O15121 323 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 LDLRAD4O15165 306 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 RHBDL1O75783 438 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 SFTPBP07988 381 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 GSTP1P09211 210 aaKnown RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 CD3GP09693 182 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 GSTT2BP0CG30 244 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 GATA4P43694 442 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 NPBWR2P48146 333 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ACTBP60709 375 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ACTG1P63261 375 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 MPPED2Q15777 294 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 KCNJ8Q15842 424 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 TAF9Q16594 264 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 MICBQ29980 383 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF181Q2M3W8 571 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 PIGYQ3MUY2 71 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 TMEM255AQ5JRV8 349 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF57Q68EA5 555 aaPredicted RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 SP5Q6BEB4 398 aaPredicted RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ELP2Q6IA86 826 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 WDR82Q6UXN9 313 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 C1QL2Q7Z5L3 287 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 OR4M2Q8NGB6 313 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 PPP1R35Q8TAP8 253 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 NEU4Q8WWR8 484 aaPredicted RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 Q96M66 194 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 CACNG6Q9BXT2 260 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 FGF23Q9GZV9 251 aaPredicted RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 TLNRD1Q9H1K6 362 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 CHMP1AQ9HD42 196 aaPredicted RBP8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 PALMDQ9NP74 551 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 ABCB10Q9NRK6 738 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 MTCH1Q9NZJ7 389 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 V9GYH0 126 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 CADP27708 2225 aa8.7□□□□□ -1.02
PRPF38A-202ENST00000474048 SPTBN1Q01082 2364 aaKnown RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 IGKV1-12A0A0C4DH73 117 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 IGHV1-69-2A0A0G2JMI3 117 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 CENPXA8MT69 81 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 MCRIP1C9JLW8 97 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 GEMIN2O14893 280 aaKnown RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 PDCD6O75340 191 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 KNG1P01042 644 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 IGKV1D-12P01611 117 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 ACAA1P09110 424 aaPredicted RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 RNF224P0DH78 156 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 HIST1H1DP16402 221 aaKnown RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 FUT3P21217 361 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 LOXP28300 417 aaPredicted RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 CBX5P45973 191 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 QRFPP83859 136 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 PNLIPRP3Q17RR3 467 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 SWI5Q1ZZU3 235 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 CDNFQ49AH0 187 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 NHLRC3Q5JS37 347 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 HACD4Q5VWC8 232 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF826PQ6ZT77 177 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM90A1Q86YD7 464 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 LILRB1Q8NHL6 650 aaPredicted RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 CCL17Q92583 94 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 TIMD4Q96H15 378 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 C1orf147Q96MC9 270 aaPredicted RBP8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 CCL19Q99731 98 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 NRIP2Q9BQI9 281 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 NICN1Q9BSH3 213 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 SCPEP1Q9HB40 452 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 GCM1Q9NP62 436 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 TAS2R8Q9NYW2 309 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms