RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DANCRP0C864 163 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF728P0DKX0 622 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 HMGN3Q15651 99 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 ABCA11PQ4W5N1 156 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 PHLDA2Q53GA4 152 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 C10orf128Q5T292 105 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF468Q5VIY5 522 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-207ENST00000473212 MRPL14Q6P1L8 145 aaKnown RBP18.36■□□□□ 0.53
COL18A1-207ENST00000473212 RTN4IP1Q8WWV3 396 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-207ENST00000473212 SGK3Q96BR1 496 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 ARV1Q9H2C2 271 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 NAA60Q9H7X0 242 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 SPACA1Q9HBV2 294 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 C5orf52A6NGY3 159 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 M0R036 132 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 S100A6P06703 90 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 OTX1P32242 354 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-207ENST00000473212 RSU1Q15404 277 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 EIF2S3LQ2VIR3 472 aaKnown RBP18.35■□□□□ 0.53
COL18A1-207ENST00000473212 PLXDC2Q6UX71 529 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 SLC16A13Q7RTY0 426 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 TMEM156Q8N614 296 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 ZIC4Q8N9L1 334 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 TMEM54Q969K7 222 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 MARS2Q96GW9 593 aaKnown RBP18.35■□□□□ 0.53
COL18A1-207ENST00000473212 SCRT1Q9BWW7 348 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 SRXN1Q9BYN0 137 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 METTL9Q9H1A3 318 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 NECAP2Q9NVZ3 263 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-207ENST00000473212 A6NLC8 198 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 DHHO43323 396 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 ZIC3O60481 467 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 NR2C1P13056 603 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 CAMLGP49069 296 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 KRBOX4Q5JUW0 171 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 TMEM123Q8N131 208 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 REEP6Q96HR9 211 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 SH3BGRL3Q9H299 93 aa18.35■□□□□ 0.53
COL18A1-207ENST00000473212 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-207ENST00000473212 A0A0J9YW62 118 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 A0A1W2PPE3 182 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 NPIPA2E9PIF3 369 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 NPIPA3F8WFD2 350 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 K7ESF4 209 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 SEC11BP0C7V7 166 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 EPHA8P29322 1005 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-207ENST00000473212 BORCS7-ASMTA0A0B4J1R7 106 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 A0A1W2PPH5 198 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 TOX3O15405 576 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-207ENST00000473212 HIST1H3AP68431 136 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 HIST2H3PS2Q5TEC6 136 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 HIST2H3AQ71DI3 136 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 OR52M1Q8NGK5 317 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 OR5L1Q8NGL2 311 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 LUZP4Q9P127 313 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 ZDHHC8Q9ULC8 765 aa18.34■□□□□ 0.53
COL18A1-207ENST00000473212 MT-ND4LP03901 98 aa18.33■□□□□ 0.53
COL18A1-207ENST00000473212 UMODP07911 640 aa18.33■□□□□ 0.53
COL18A1-207ENST00000473212 Q6ZSR3 168 aa18.33■□□□□ 0.53
COL18A1-207ENST00000473212 A0A0G2JMM0 328 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1B0GV50 99 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1W2PPB8 328 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1W2PRS3 328 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 KIR3DP1A8MWS1 328 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 GPR137BO60478 399 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 PRH1P02810 166 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 P2RY1P47900 373 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 NOVA1P51513 510 aaKnown RBP18.33■□□□□ 0.52
COL18A1-207ENST00000473212 RNF212Q495C1 297 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 ZNF774Q6NX45 483 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 C5orf24Q7Z6I8 188 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 SPEM1Q8N4L4 309 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 HSD17B11Q8NBQ5 300 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 SPTSSAQ969W0 71 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 C10orf35Q96D05 121 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 GINS3Q9BRX5 216 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 ULBP2Q9BZM5 246 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 C19orf12Q9NSK7 152 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 MRPS17Q9Y2R5 130 aaKnown RBP18.33■□□□□ 0.52
COL18A1-207ENST00000473212 NCKAP5O14513 1909 aa18.33■□□□□ 0.52
COL18A1-207ENST00000473212 NHLH2Q02577 135 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 ZNF561Q8N587 486 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 SGCEO43556 437 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 ZNF806P0C7X5 589 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 UCP2P55851 309 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 PIGYQ3MUY2 71 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 FOXL2NBQ6ZUU3 175 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 COMMD1Q8N668 190 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 AKR7LQ8NHP1 331 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 GALNT14Q96FL9 552 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 SLC2A9Q9NRM0 540 aa18.32■□□□□ 0.52
COL18A1-207ENST00000473212 C19orf25Q9UFG5 118 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-207ENST00000473212 PTRH2Q9Y3E5 179 aaKnown RBP18.32■□□□□ 0.52
COL18A1-207ENST00000473212 hCG_1809904A0A1W2PP81 198 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1W2PR64 198 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1W2PRV1 198 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 UBE2CO00762 179 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms