RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 VWA8A3KMH1 1905 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 C9JQL5 133 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 D6RAR5 112 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 OR2A4O95047 310 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 OR5AL1P0C617 328 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 IL5RAQ01344 420 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 OR2K2Q8NGT1 345 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 OR8S1Q8NH09 359 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 OR2A7Q96R45 310 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 METTL26Q96S19 204 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 PARP11Q9NR21 331 aa2.29□□□□□ -2.04
CLK1-209ENST00000472679 RBM22Q9NW64 420 aaKnown RBP eCLIP2.29□□□□□ -2.04
CLK1-209ENST00000472679 RNF113AO15541 343 aaKnown RBP2.28□□□□□ -2.04
CLK1-209ENST00000472679 SNRPAP09012 282 aaKnown RBP2.28□□□□□ -2.04
CLK1-209ENST00000472679 NUDT2P50583 147 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
CLK1-209ENST00000472679 LINC00523Q86TU6 105 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 CCNYL1Q8N7R7 359 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 NT5CQ8TCD5 201 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 TOP1MTQ969P6 601 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 COA1Q9GZY4 146 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 FBXO44Q9H4M3 255 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 CRLF2Q9HC73 371 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 RPRD1BQ9NQG5 326 aaKnown RBP2.28□□□□□ -2.04
CLK1-209ENST00000472679 TAC3Q9UHF0 121 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 CFL2Q9Y281 166 aa2.28□□□□□ -2.04
CLK1-209ENST00000472679 ZNF706Q9Y5V0 76 aaPredicted RBP2.28□□□□□ -2.04
CLK1-209ENST00000472679 H7C2Y5 167 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 ETHE1O95571 254 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 MSR1P21757 451 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 CLLU1OSQ5K130 101 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 DUPD1Q68J44 220 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 EIF4E3Q8N5X7 224 aaKnown RBP2.27□□□□□ -2.05
CLK1-209ENST00000472679 OR51L1Q8NGJ5 315 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 CENPNQ96H22 339 aaPredicted RBP2.27□□□□□ -2.05
CLK1-209ENST00000472679 SRRQ9GZT4 340 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 NLE1Q9NVX2 485 aaPredicted RBP2.27□□□□□ -2.05
CLK1-209ENST00000472679 SLC7A11Q9UPY5 501 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 ACOT9Q9Y305 439 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 INSIG2Q9Y5U4 225 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 DYSFO75923 2080 aa2.27□□□□□ -2.05
CLK1-209ENST00000472679 MROH5Q6ZUA9 1318 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 NUP205Q92621 2012 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 ZNF729A6NN14 1252 aaPredicted RBP2.26□□□□□ -2.05
CLK1-209ENST00000472679 GGTLC3B5MD39 225 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 K7EPK0 472 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 M0R1B8 84 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 IGHV3-53P01767 116 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 P2RY2P41231 377 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 SLC18A1P54219 525 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 TAS2R60P59551 318 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 PSMC5P62195 406 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 TOMM34Q15785 309 aaPredicted RBP2.26□□□□□ -2.05
CLK1-209ENST00000472679 SSX1Q16384 188 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 TMEM241Q24JQ0 296 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 NDUFAF6Q330K2 333 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 AMN1Q8IY45 258 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 ANP32EQ9BTT0 268 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 RAB23Q9ULC3 237 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 TRAPPC1Q9Y5R8 145 aa2.26□□□□□ -2.05
CLK1-209ENST00000472679 SPATA31E1Q6ZUB1 1445 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 MIA3Q5JRA6 1907 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 LOC389332A0A1B0GUA5 103 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 GMNCA6NCL1 334 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 RGS5O15539 181 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 SYNGR2O43760 224 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 GMDSO60547 372 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 DEDDO75618 318 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 IGKV1D-33P01593 117 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 IGKV1-33P01594 117 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 LIPCP11150 499 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 ZNF708P17019 499 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 PSMD8P48556 350 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 DYNC1I2Q13409 638 aaKnown RBP2.25□□□□□ -2.05
CLK1-209ENST00000472679 ZNF404Q494X3 552 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 COMTD1Q86VU5 262 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 ZFP82Q8N141 532 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 SHCBP1LQ9BZQ2 653 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 NCOR1P1Q9H4R4 102 aa2.25□□□□□ -2.05
CLK1-209ENST00000472679 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 ALOX12BO75342 701 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 PTHLHP12272 177 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 IMPA1P29218 277 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
CLK1-209ENST00000472679 LGALSLQ3ZCW2 172 aaPredicted RBP2.24□□□□□ -2.05
CLK1-209ENST00000472679 LINC00596Q86U02 117 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 NELFCDQ8IXH7 590 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 ARHGAP18Q8N392 663 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 UBA3Q8TBC4 463 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 QKIQ96PU8 341 aaKnown RBP eCLIP2.24□□□□□ -2.05
CLK1-209ENST00000472679 STACQ99469 402 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 SLC38A1Q9H2H9 487 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 LZTFL1Q9NQ48 299 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 IFNKQ9P0W0 207 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 ZNF443Q9Y2A4 671 aaPredicted RBP2.24□□□□□ -2.05
CLK1-209ENST00000472679 ZNF780BQ9Y6R6 833 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
CLK1-209ENST00000472679 TRAV8-7A0A075B6U6 113 aa2.23□□□□□ -2.05
CLK1-209ENST00000472679 A0A1W2PPV4 95 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms