RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 LIPCP11150 499 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CD9P21926 228 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CD34P28906 385 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 TUFMP49411 452 aaKnown RBP1.85□□□□□ -2.11
PTCD3-209ENST00000472044 NUDT2P50583 147 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 SLC18A1P54219 525 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CARD18P57730 90 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 IL5RAQ01344 420 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ELOCQ15369 112 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ATP6AP1LQ52LC2 224 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CLEC12AQ5QGZ9 265 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CLEC18BQ6UXF7 455 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 SYS1Q8N2H4 156 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF664Q8N3J9 261 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 OR4D6Q8NGJ1 314 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 UBA3Q8TBC4 463 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ITLN2Q8WWU7 325 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-209ENST00000472044 CACNG8Q8WXS5 425 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 TNFRSF14Q92956 283 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 TM2D3Q9BRN9 247 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 THTPAQ9BU02 230 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 SLC38A1Q9H2H9 487 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ASB7Q9H672 318 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 RBM22Q9NW64 420 aaKnown RBP eCLIP1.85□□□□□ -2.11
PTCD3-209ENST00000472044 STMN3Q9NZ72 180 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF492Q9P255 531 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 SDK2Q58EX2 2172 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 COL5A1P20908 1838 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-209ENST00000472044 NOS1P29475 1434 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 BAZ1BQ9UIG0 1483 aaKnown RBP1.84□□□□□ -2.11
PTCD3-209ENST00000472044 TVP23AA6NH52 213 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 OR2AT4A6NND4 320 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 K7EN84 100 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 RNF113AO15541 343 aaKnown RBP1.84□□□□□ -2.11
PTCD3-209ENST00000472044 SLC37A4O43826 429 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 ZMPSTE24O75844 475 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 OR2A4O95047 310 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 CD8AP01732 235 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 SLC6A1P30531 599 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 ATP5J2P56134 94 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 TAF9Q16594 264 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 CEACAM16Q2WEN9 425 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF404Q494X3 552 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 PRNTQ86SH4 94 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 GAPTQ8N292 157 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 CCNYL1Q8N7R7 359 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 OR6K2Q8NGY2 324 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 OR51Q1Q8NH59 317 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 PPP1R36Q96LQ0 422 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 OR2A7Q96R45 310 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 UTP23Q9BRU9 249 aaKnown RBP1.84□□□□□ -2.11
PTCD3-209ENST00000472044 PORCNQ9H237 461 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 VSIRQ9H7M9 311 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 VCX3AQ9NNX9 186 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 TMEM38BQ9NVV0 291 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 SDHAF2Q9NX18 166 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 INSIG2Q9Y5U4 225 aa1.84□□□□□ -2.11
PTCD3-209ENST00000472044 ZBED9Q6R2W3 1325 aa1.84□□□□□ -2.12
PTCD3-209ENST00000472044 IGLL5B9A064 214 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 K7EPK0 472 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 UPK2O00526 184 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 HRES1P13985 223 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 TAC1P20366 129 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 SPIN3Q5JUX0 258 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 C6orf183Q5T699 404 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 UGT2A3Q6UWM9 527 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 USP50Q70EL3 339 aaPredicted RBP1.83□□□□□ -2.12
PTCD3-209ENST00000472044 FAM19A1Q7Z5A9 133 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 OR4C13Q8NGP0 309 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 OR8K3Q8NH51 312 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 LGALS14Q8TCE9 139 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 DOK4Q8TEW6 326 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 ADTRPQ96IZ2 230 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 QKIQ96PU8 341 aaKnown RBP eCLIP1.83□□□□□ -2.12
PTCD3-209ENST00000472044 OR2V2Q96R30 315 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 ACOT13Q9NPJ3 140 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 OR2S2Q9NQN1 319 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 TAC3Q9UHF0 121 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF391Q9UJN7 358 aa1.83□□□□□ -2.12
PTCD3-209ENST00000472044 NACADO15069 1562 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 LOC389332A0A1B0GUA5 103 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 A0A1W2PNN7 141 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 CXorf1O96002 111 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 IGLV6-57P01721 117 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 PTHLHP12272 177 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF35P13682 527 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 IMPA1P29218 277 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 DNASE1L1P49184 302 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 PRKCDQ05655 676 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 BAMBIQ13145 260 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 SSX1Q16384 188 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 FAHD1Q6P587 224 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 RPRMLQ8N4K4 120 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 CDKL2Q92772 493 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 VAT1Q99536 393 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 SDHAF3Q9NRP4 125 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms