RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 KLF13Q9Y2Y9 288 aaPredicted RBP4.26□□□□□ -1.73
SMC5-202ENST00000471372 IGLV4-69A0A075B6H9 119 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 LOC102724200A0A096LPH7 203 aaPredicted RBP4.25□□□□□ -1.73
SMC5-202ENST00000471372 C9J4A7 227 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 UPK1AO00322 258 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 CDK1P06493 297 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 LGALS7P47929 136 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 MNAT1P51948 309 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 SLC18A1P54219 525 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 CMC4P56277 68 aaPredicted RBP4.25□□□□□ -1.73
SMC5-202ENST00000471372 PITPNAQ00169 270 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 UBE2SQ16763 222 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 YIF1BQ5BJH7 314 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 CDKL4Q5MAI5 379 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 FAM151BQ6UXP7 276 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 LFNGQ8NES3 379 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 OR5T1Q8NG75 326 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 SRSF12Q8WXF0 261 aaKnown RBP4.25□□□□□ -1.73
SMC5-202ENST00000471372 OR10C1Q96KK4 312 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 TAPBPLQ9BX59 468 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 SLC19A3Q9BZV2 496 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 DHX35Q9H5Z1 703 aaKnown RBP4.25□□□□□ -1.73
SMC5-202ENST00000471372 ASB7Q9H672 318 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 CELA1Q9UNI1 258 aa4.25□□□□□ -1.73
SMC5-202ENST00000471372 PLIN3O60664 434 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 PSIP1O75475 530 aaKnown RBP4.24□□□□□ -1.73
SMC5-202ENST00000471372 KLHL2O95198 593 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 ADRA2AP08913 450 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 CXCL12P48061 93 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 CDC34P49427 236 aaPredicted RBP4.24□□□□□ -1.73
SMC5-202ENST00000471372 RPL14P50914 215 aaKnown RBP4.24□□□□□ -1.73
SMC5-202ENST00000471372 PSMD7P51665 324 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 MYL6P60660 151 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 RAB8AP61006 207 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 UBE2IP63279 158 aaKnown RBP4.24□□□□□ -1.73
SMC5-202ENST00000471372 PRDX1Q06830 199 aaKnown RBP4.24□□□□□ -1.73
SMC5-202ENST00000471372 BNIP2Q12982 314 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 ZNF684Q5T5D7 378 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 CLEC18BQ6UXF7 455 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 CCL17Q92583 94 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 PITX2Q99697 317 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 INSIG2Q9Y5U4 225 aa4.24□□□□□ -1.73
SMC5-202ENST00000471372 MYO3BQ8WXR4 1341 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 IGSF9BQ9UPX0 1349 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 A0A0A6YYH2 397 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 A0A0G2JMP0 313 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 A0A0X1KG70 313 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 LOC389332A0A1B0GUA5 103 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 A0A1W2PRG6 482 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 A6NJ64 397 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 FGF16O43320 207 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 HLA-DQB1P01920 261 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 ORM1P02763 201 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 STC1P52823 247 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 DMC1Q14565 340 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 Q499Y3 187 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 MED27Q6P2C8 311 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 ZFP1Q6P2D0 407 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 IGFL2Q6UWQ7 119 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 ZFP2Q6ZN57 461 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 TPGS1Q6ZTW0 290 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 BLIDQ8IZY5 108 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 ACBD4Q8NC06 268 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 ZNF420Q8TAQ5 688 aaPredicted RBP4.23□□□□□ -1.73
SMC5-202ENST00000471372 DDIT4LQ96D03 193 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 SUCNR1Q9BXA5 334 aa4.23□□□□□ -1.73
SMC5-202ENST00000471372 EXOSC4Q9NPD3 245 aaKnown RBP4.23□□□□□ -1.73
SMC5-202ENST00000471372 IGHV3-49A0A0A0MS15 119 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 TMEM72A0PK05 275 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 H3BP45 60 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 FFAR1O14842 300 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 LIN7AO14910 233 aaPredicted RBP4.22□□□□□ -1.73
SMC5-202ENST00000471372 RBFOX2O43251 390 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMC5-202ENST00000471372 CTDNEP1O95476 244 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 OR4Q2P0C623 313 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 PVALBP20472 110 aaPredicted RBP4.22□□□□□ -1.73
SMC5-202ENST00000471372 OPRK1P41145 380 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 CCL23P55773 120 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 HBG1P69891 147 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 HBG2P69892 147 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 ZNF404Q494X3 552 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 PTRHD1Q6GMV3 140 aaKnown RBP4.22□□□□□ -1.73
SMC5-202ENST00000471372 FAM183BPQ6ZVS7 135 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 LINC01560Q8TB33 94 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 APOL4Q9BPW4 351 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 POTEKPQ9BYX7 375 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 SND1-IT1Q9HBX3 110 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 ANAPC11Q9NYG5 84 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 TAS2R5Q9NYW4 299 aa4.22□□□□□ -1.73
SMC5-202ENST00000471372 CENPBD1B2RD01 187 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 GOLGA8KD6RF30 607 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 GOLGA8MH3BSY2 632 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 UPK2O00526 184 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 ATP8B1O43520 1251 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 OR2A4O95047 310 aa4.21□□□□□ -1.74
SMC5-202ENST00000471372 IGKV1-39P01597 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms