RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CDH24Q86UP0 819 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 MFSD4AQ8N468 514 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 FTMTQ8N4E7 242 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 JAGN1Q8N5M9 183 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 OR6Q1Q8NGQ2 317 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 OR8S1Q8NH09 359 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-207ENST00000471342 PTX4Q96A99 478 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 DACT3Q96B18 629 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-207ENST00000471342 WDFY2Q96P53 400 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 IFT22Q9H7X7 185 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 C14orf119Q9NWQ9 140 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 CKLFQ9UBR5 152 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 SLC7A11Q9UPY5 501 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 NAV2Q8IVL1 2488 aa8.26□□□□□ -1.09
SF3A1-207ENST00000471342 TANC2Q9HCD6 1990 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 HPGDSO60760 199 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM127O75204 238 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ERCC1P07992 297 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 BMP4P12644 408 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 SELLP14151 372 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 RAB6AP20340 208 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 TNFSF8P32971 234 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 CD80P33681 288 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 SRP9P49458 86 aaKnown RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 CEBPDP49716 269 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 PSMD7P51665 324 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 SCAND1P57086 179 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 OLFML2AQ68BL7 652 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF788Q6ZQV5 615 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 C17orf107Q6ZR85 190 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 OR2W3Q7Z3T1 314 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 LRRC28Q86X40 367 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 LAX1Q8IWV1 398 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 GAPTQ8N292 157 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF525Q8N782 197 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF671Q8TAW3 534 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 LRRC29Q8WV35 223 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 RDH5Q92781 318 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 CEP19Q96LK0 163 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 GAFA1Q96PS6 74 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 SAP30LQ9HAJ7 183 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 DYNLRB1Q9NP97 96 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ABRACLQ9P1F3 81 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 GHRLQ9UBU3 117 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 ING4Q9UNL4 249 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 V9GYH0 126 aa8.25□□□□□ -1.09
SF3A1-207ENST00000471342 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
SF3A1-207ENST00000471342 IGHV3OR15-7A0A075B7D8 119 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 VSTM5A8MXK1 200 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 F5H0A9 414 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-207ENST00000471342 GEMIN2O14893 280 aaKnown RBP8.24□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM225BP0DP42 221 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 DAOP14920 347 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ARSBP15848 533 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 MGMTP16455 207 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 CHATP28329 748 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 DUSP1P28562 367 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ETV6P41212 452 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 RBM11P57052 281 aaKnown RBP8.24□□□□□ -1.09
SF3A1-207ENST00000471342 LMO4P61968 165 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 PAX2Q02962 417 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF79Q15937 498 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 DEFB113Q30KQ7 82 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF260Q3ZCT1 412 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ZNF404Q494X3 552 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 SLC22A6Q4U2R8 563 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 TCF23Q7RTU1 214 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 C5orf24Q7Z6I8 188 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 FAM58AQ8N1B3 248 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 OR5T2Q8NGG2 359 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ST8SIA4Q92187 359 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 SDSLQ96GA7 329 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 ABHD1Q96SE0 405 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 CCL19Q99731 98 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 VRK1Q99986 396 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-207ENST00000471342 SLITRK2Q9H156 845 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 SMURF1Q9HCE7 757 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 AKIP1Q9NQ31 210 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 FAIMQ9NVQ4 179 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 PTTG2Q9NZH5 202 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 RNF7Q9UBF6 113 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 PPP1R3CQ9UQK1 317 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
SF3A1-207ENST00000471342 IGHV4-30-2A0A087WSY4 118 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-207ENST00000471342 LGALS8O00214 317 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 SLC33A1O00400 549 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-207ENST00000471342 MFNGO00587 321 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 SSX5O60225 188 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 MELTFP08582 738 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 UBBP0CG47 229 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 PTHLHP12272 177 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 MNDAP41218 407 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 TAF9Q16594 264 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 AWAT2Q6E213 333 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms