RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MZT2BQ6NZ67 158 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF322Q6U7Q0 402 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 KRT74Q7RTS7 529 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 FAM90A1Q86YD7 464 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 RDH10Q8IZV5 341 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 ACBD7Q8N6N7 88 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 OR6F1Q8NGZ6 308 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 DIRAS2Q96HU8 199 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 C1orf147Q96MC9 270 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 TEAD3Q99594 435 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 SOSTQ9BQB4 213 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 PAPOLGQ9BWT3 736 aaKnown RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 RABL2BQ9UNT1 228 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 TMEM14AQ9Y6G1 99 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 CCDC182A6NF36 153 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 TMPRSS2O15393 492 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF254O75437 659 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 GYPAP02724 150 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 S100A1P23297 94 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 RFX2P48378 723 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 FABP5Q01469 135 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 CD300CQ08708 224 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 GFOD2Q3B7J2 385 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 FAM76BQ5HYJ3 339 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 OR2G6Q5TZ20 316 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 TRIQKQ629K1 86 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 MEPCEQ7L2J0 689 aaKnown RBP11.19□□□□□ -0.62
HMGN1-211ENST00000471260 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 BCDIN3DQ7Z5W3 292 aaKnown RBP11.19□□□□□ -0.62
HMGN1-211ENST00000471260 NRARPQ7Z6K4 114 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 WDR86Q86TI4 376 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 TPRA1Q86W33 373 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 OR10Z1Q8NGY1 313 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 ASB17Q8WXJ9 295 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF649Q9BS31 505 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 RTL8AQ9BWD3 113 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 DNTTIP1Q9H147 329 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 HAO2Q9NYQ3 351 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 RHBDD3Q9Y3P4 386 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
HMGN1-211ENST00000471260 A0A0U1RQV5 110 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 GABRPO00591 440 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 TOX4O94842 621 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 CD1AP06126 327 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 MMP9P14780 707 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 HLA-DMAP28067 261 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 PDCD1Q15116 288 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 SLC9A3R2Q15599 337 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 ATPAF1Q5TC12 328 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-211ENST00000471260 METTL11BQ5VVY1 283 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 KRT77Q7Z794 578 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 BBS1Q8NFJ9 593 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 OR8B12Q8NGG6 310 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 ENKURQ8TC29 256 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 GATAD2BQ8WXI9 593 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 MRPL48Q96GC5 212 aaKnown RBP11.18□□□□□ -0.62
HMGN1-211ENST00000471260 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 NEK6Q9HC98 313 aa11.18□□□□□ -0.62
HMGN1-211ENST00000471260 IGHV3OR16-10A0A075B7F0 116 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF850A8MQ14 1090 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 DVL1O14640 695 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 CDIPTO14735 213 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 EGR1P18146 543 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ACKR3P25106 362 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 MAP2K3P46734 347 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 IL13RA1P78552 427 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ROM1Q03395 351 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 PRDX4Q13162 271 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 GALEQ14376 348 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 BAK1Q16611 211 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ZFP69Q49AA0 526 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 BAIAP2L2Q6UXY1 529 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 BTN2A1Q7KYR7 527 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF679Q8IYX0 411 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 TMEM86BQ8N661 226 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 PIGCQ92535 297 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 RNF170Q96K19 258 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 FAM71F1Q96KD3 344 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-211ENST00000471260 LYZL4Q96KX0 146 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 MNTQ99583 582 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 CNTD2Q9H8S5 307 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 KPTNQ9Y664 436 aa11.17□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms