RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SCAF11Q99590 1463 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 MRC2Q9UBG0 1479 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 CUBNO60494 3623 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 LAMB4A4D0S4 1761 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 EHBP1L1Q8N3D4 1523 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 A0A0B4J2C4 111 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR2AG2A6NM03 316 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 FFAR1O14842 300 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ERI3O43414 337 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 S1PR2O95136 353 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 CDK1P06493 297 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 CLTAP09496 248 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 GTF2E2P29084 291 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF140P52738 457 aaPredicted RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR2B8PP59922 312 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 KRTAP10-4P60372 401 aaPredicted RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 UBE2MP61081 183 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 FOXF1Q12946 379 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TRDNQ13061 729 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 DHRS2Q13268 280 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ENDOGQ14249 297 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 WDR82Q6UXN9 313 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 Q6ZQT7 251 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TCF23Q7RTU1 214 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 NANOGNBQ7Z5D8 188 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ITPRIPQ8IWB1 547 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ZDHHC22Q8N966 263 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 DNAAF3Q8N9W5 541 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 WDR31Q8NA23 367 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 Q8NAQ8 132 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 BPIFB6Q8NFQ5 453 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR10D4PQ8NGN7 298 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR8S1Q8NH09 359 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR4K13Q8NH42 304 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR51F2Q8NH61 342 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR1S1Q8NH92 325 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 AKR7LQ8NHP1 331 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ASZ1Q8WWH4 475 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 MRPL48Q96GC5 212 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 SMARCD1Q96GM5 515 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 OR8B2Q96RD0 313 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 GPR21Q99679 349 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 C20orf24Q9BUV8 137 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 KRTAP2-1Q9BYU5 128 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TTTY12Q9BZ98 90 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 PKIBQ9C010 78 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 NT5C3AQ9H0P0 336 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 PRO3102Q9H379 93 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TUBA4BQ9H853 241 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TREX1Q9NSU2 369 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 TMEM100Q9NV29 134 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 MRPL16Q9NX20 251 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 NDRG2Q9UN36 371 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 PPIL1Q9Y3C6 166 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 ENPP4Q9Y6X5 453 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 NWD1Q149M9 1564 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 PLXNB3Q9ULL4 1909 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 USH2AO75445 5202 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 MAP3K5Q99683 1374 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 SVEP1Q4LDE5 3571 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 HECTD4Q9Y4D8 3996 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 LRRC7Q96NW7 1537 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 DOPEY2Q9Y3R5 2298 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF860A6NHJ4 632 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 H0Y8G0 127 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 MYL12BO14950 172 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 CTAG2O75638 210 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 OR2F2O95006 317 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 CCNB2O95067 398 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TDP2O95551 362 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 PTHP01270 115 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 PTHLHP12272 177 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 HLA-GP17693 338 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 STOMP27105 288 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 NBL1P41271 181 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SLC1A2P43004 574 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SULT1E1P49888 294 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 AP1S2P56377 157 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ATP5IP56385 69 aaPredicted RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 RPS15AP62244 130 aaKnown RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TFDP2Q14188 446 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 MAJINQ3KP22 176 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ALKBH6Q3KRA9 238 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 LINC00303Q3SY05 128 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TTC19Q6DKK2 380 aaPredicted RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 RWDD4Q6NW29 188 aaKnown RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 CLEC18BQ6UXF7 455 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 NAA40Q86UY6 237 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 UNC93AQ86WB7 457 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SLC22A9Q8IVM8 553 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 MSRB3Q8IXL7 192 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ZCCHC24Q8N2G6 241 aaKnown RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 JAGN1Q8N5M9 183 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 C3orf22Q8N5N4 141 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 OR56A4Q8NGH8 313 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 OR5H2Q8NGV7 314 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 NRGNQ92686 78 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 C8orf44Q96CB5 159 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 RASD2Q96D21 266 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms