RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SMIM12Q96EX1 92 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SLC35E1Q96K37 410 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 DOK1Q99704 481 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF717Q9BY31 904 aaPredicted RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 PECRQ9BY49 303 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SPANXA1Q9NS26 97 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF223Q9UK11 482 aaPredicted RBP3□□□□□ -1.93
COL11A1-208ENST00000470170 HHLA2Q9UM44 414 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 SLC7A11Q9UPY5 501 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 TP53TG1Q9Y2A0 90 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 NDUFAF1Q9Y375 327 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 WSB1Q9Y6I7 421 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 NUP155O75694 1391 aa3□□□□□ -1.93
COL11A1-208ENST00000470170 IGKV2-28A0A075B6P5 120 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 SMIM9A6NGZ8 99 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 CLDN24A6NM45 220 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 MIF4GDA9UHW6 222 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 ANKRD65E5RJM6 399 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 K7EMT4 169 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PHYHO14832 338 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TTC4O95801 387 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 IGKV2D-28P01615 120 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 CST2P09228 141 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 ZNF250P15622 560 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 MYL12AP19105 171 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 RPL12P30050 165 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 GRPRP30550 384 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PYCR1P32322 319 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PMELP40967 661 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 BTDP43251 543 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 SRP9P49458 86 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 FABP6P51161 128 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 FGF8P55075 233 aaPredicted RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 LIM2P55344 173 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 AP1S1P61966 158 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 MRPS11P82912 194 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 RPL18AQ02543 176 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TWF1Q12792 350 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 CLINT1Q14677 625 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 OR7A5Q15622 319 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TSNQ15631 228 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 ARHGAP11BQ3KRB8 267 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 HIST2H3PS2Q5TEC6 136 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 FAM71E1Q6IPT2 247 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TNFAIP8L2Q6P589 184 aaPredicted RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PRSS41Q7RTY9 318 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PEX26Q7Z412 305 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 FAM19A5Q7Z5A7 132 aaPredicted RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TMEM144Q7Z5S9 345 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 THOC6Q86W42 341 aaKnown RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 DHFR2Q86XF0 187 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 SKA3Q8IX90 412 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 LRRC25Q8N386 305 aaPredicted RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 FTMTQ8N4E7 242 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 UBL4BQ8N7F7 174 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 CLDN22Q8N7P3 220 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TMEM161BQ8NDZ6 487 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 OR51E1Q8TCB6 317 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 ZFAND1Q8TCF1 268 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 EEF1AKMT1Q8WVE0 214 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 DDIT4LQ96D03 193 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 DYNLL2Q96FJ2 89 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 CMTM7Q96FZ5 175 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PAGE5Q96GU1 130 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 QKIQ96PU8 341 aaKnown RBP eCLIP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 SMIM14Q96QK8 99 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 MCHR1Q99705 422 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 RASL11BQ9BPW5 248 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 OSBPL11Q9BXB4 747 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 ACTR6Q9GZN1 396 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 COA1Q9GZY4 146 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 NMNAT1Q9HAN9 279 aaPredicted RBP2.99□□□□□ -1.93
COL11A1-208ENST00000470170 MARCH5Q9NX47 278 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 TAS2R13Q9NYV9 303 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 KCNIP1Q9NZI2 227 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 USP6P35125 1406 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 PLEKHG1Q9ULL1 1385 aa2.99□□□□□ -1.93
COL11A1-208ENST00000470170 LOC100131303A0A0U1RQF7 123 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 CEACAM18A8MTB9 384 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 GABRPO00591 440 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 NUPL2O15504 423 aaKnown RBP2.98□□□□□ -1.93
COL11A1-208ENST00000470170 FAM189A1O60320 539 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 TBL1XO60907 577 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 CNMDO75829 334 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 OXTP01178 125 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 MRPL3P09001 348 aaKnown RBP2.98□□□□□ -1.93
COL11A1-208ENST00000470170 IFI30P13284 250 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 CD99P14209 185 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 AKR1C4P17516 323 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 PSMB9P28065 219 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 ADORA1P30542 326 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 SHMT2P34897 504 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 RPS9P46781 194 aaKnown RBP2.98□□□□□ -1.93
COL11A1-208ENST00000470170 ERFP50548 548 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 VSX2P58304 361 aaPredicted RBP2.98□□□□□ -1.93
COL11A1-208ENST00000470170 SEMG2Q02383 582 aa2.98□□□□□ -1.93
COL11A1-208ENST00000470170 SLC25A11Q02978 314 aaKnown RBP2.98□□□□□ -1.93
COL11A1-208ENST00000470170 EGFEM1PQ0D2K5 195 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms