RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ACTA2P62736 377 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 ACTG2P63267 376 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 ACTC1P68032 377 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 ACTA1P68133 377 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 SLC34A1Q06495 639 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 EDDM3AQ14507 147 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 PTGES3Q15185 160 aaKnown RBP9.84□□□□□ -0.83
HDAC3-204ENST00000469207 UBE2V2Q15819 145 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 ZNF829Q3KNS6 432 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-204ENST00000469207 TCTEX1D4Q5JR98 221 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 ZNF322Q6U7Q0 402 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-204ENST00000469207 SSX6Q7RTT6 188 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 OR4F17Q8NGA8 305 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 SLAMF9Q96A28 289 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 OR4F4Q96R69 305 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 CHST6Q9GZX3 395 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 SLC25A19Q9HC21 320 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 MRM2Q9UI43 246 aaKnown RBP9.84□□□□□ -0.83
HDAC3-204ENST00000469207 TBL2Q9Y4P3 447 aaKnown RBP9.84□□□□□ -0.83
HDAC3-204ENST00000469207 R4GMQ9 66 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
HDAC3-204ENST00000469207 K7EIL1 84 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 MITFO75030 526 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-204ENST00000469207 IGHA1P01876 353 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 CHRM2P08172 466 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 CD33P20138 364 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-204ENST00000469207 OR12D2P58182 307 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 KRTAP10-11P60412 298 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 CD83Q01151 205 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 GK3PQ14409 553 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 BCL2L15Q5TBC7 163 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 C11orf87Q6NUJ2 197 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 CCDC121Q6ZUS5 278 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 GDPD3Q7L5L3 318 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 SLC35F2Q8IXU6 374 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 WFDC9Q8NEX5 89 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 ASB17Q8WXJ9 295 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 ZNF714Q96N38 554 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 TBX5Q99593 518 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 POLDIP2Q9Y2S7 368 aa9.83□□□□□ -0.84
HDAC3-204ENST00000469207 FAM172BPA6NC97 362 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 F2RL2O00254 374 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 NPBWR2P48146 333 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 SNU13P55769 128 aaKnown RBP9.82□□□□□ -0.84
HDAC3-204ENST00000469207 CBX1P83916 185 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 IL24Q13007 206 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 DEFB121Q5J5C9 76 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 MEPCEQ7L2J0 689 aaKnown RBP9.82□□□□□ -0.84
HDAC3-204ENST00000469207 EGFL6Q8IUX8 553 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 RDH10Q8IZV5 341 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 ZNF676Q8N7Q3 588 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 TCEANCQ8N8B7 351 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 DTX3Q8N9I9 347 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 NDNFQ8TB73 568 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 CNN2Q99439 309 aaKnown RBP9.82□□□□□ -0.84
HDAC3-204ENST00000469207 PKIBQ9C010 78 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 ADGRL4Q9HBW9 690 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 PITPNC1Q9UKF7 332 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 TMEM14AQ9Y6G1 99 aa9.82□□□□□ -0.84
HDAC3-204ENST00000469207 DSCAML1Q8TD84 2053 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 IGHV2-26A0A0B4J1V2 119 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 WI2-2373I1.2A0A1W2PRP0 233 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 AQP12BA6NM10 295 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 FAM90A22PA8MWA6 464 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 PSPNO60542 156 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 FKBP6O75344 327 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 APOL3O95236 402 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 VSIG8P0DPA2 414 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 CALB2P22676 271 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 EFNB1P98172 346 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 UTF1Q5T230 341 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 LCN1P1Q5VSP4 162 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 AADACL4Q5VUY2 407 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 Q6ZSR3 168 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 SLC25A26Q70HW3 274 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 RNF144BQ7Z419 303 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 CENPVQ7Z7K6 275 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-204ENST00000469207 SPATA24Q86W54 205 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 AQP12AQ8IXF9 295 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 OR8H2Q8N162 312 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 FOXRED1Q96CU9 486 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-204ENST00000469207 SNX22Q96L94 193 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 CEP19Q96LK0 163 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 IL4I1Q96RQ9 567 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 PAPOLBQ9NRJ5 636 aaKnown RBP9.81□□□□□ -0.84
HDAC3-204ENST00000469207 RBFOX1Q9NWB1 397 aaKnown RBP9.81□□□□□ -0.84
HDAC3-204ENST00000469207 H2AFY2Q9P0M6 372 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-204ENST00000469207 SNX5Q9Y5X3 404 aa9.81□□□□□ -0.84
HDAC3-204ENST00000469207 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 ATP8B1O43520 1251 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 HAND1O96004 215 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 LPLP06858 475 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 BCL3P20749 454 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 GABRR1P24046 479 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 GDNFP39905 211 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 DYNLT3P51808 116 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 GRK1Q15835 563 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 ABCA11PQ4W5N1 156 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 VAX1Q5SQQ9 334 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms