RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 GATA3P23771 443 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 PDZK1IP1Q13113 114 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 ESCO2Q56NI9 601 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 CRIP3Q6Q6R5 217 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 PHYHIPQ92561 330 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 CEP19Q96LK0 163 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 NRIP2Q9BQI9 281 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 FAM192AQ9GZU8 254 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 SNTG1Q9NSN8 517 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 RASL12Q9NYN1 266 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 NLKQ9UBE8 527 aa12.33□□□□□ -0.44
PCOLCE-204ENST00000468214 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 LOC105371242A0A075B767 164 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TRIM64CA6NLI5 447 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ANGPTL7O43827 346 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ACAA1P09110 424 aaPredicted RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 SMIM18P0DKX4 95 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TMEM225BP0DP42 221 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ZNF93P35789 620 aaPredicted RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ZP1P60852 638 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 ACP7Q6ZNF0 438 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 Q8IYB0 196 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 PNLDC1Q8NA58 520 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TNFAIP8L1Q8WVP5 186 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 C12orf43Q96C57 262 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 NKX3-1Q99801 234 aaPredicted RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TMPRSS13Q9BYE2 586 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 SLITRK2Q9H156 845 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 PPIL3Q9H2H8 161 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 C7orf69Q9H7B7 122 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
PCOLCE-204ENST00000468214 TRDV1A0A1B0GX56 115 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 OR2AT4A6NND4 320 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 F5H0A9 414 aaPredicted RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 F8VVB4 439 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 F8VWA3 439 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 ADAM20O43506 726 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 NDUFA2O43678 99 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 SRMP19623 302 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 BCL3P20749 454 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 CALRP27797 417 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 OR3A4PP47883 348 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 ERVK11-1P61568 191 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 STUMQ69YW2 141 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 LYPD2Q6UXB3 125 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 SAXO1Q8IYX7 474 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 JAGN1Q8N5M9 183 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 ZSCAN4Q8NAM6 433 aaPredicted RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 OR8B3Q8NGG8 313 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 EMG1Q92979 244 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 NEIL1Q96FI4 390 aaPredicted RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 OR8B2Q96RD0 313 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 HES4Q9HCC6 221 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 EXOSC4Q9NPD3 245 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 STUB1Q9UNE7 303 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
PCOLCE-204ENST00000468214 IGKV1-12A0A0C4DH73 117 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 TMPRSS2O15393 492 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 KDM4BO94953 1096 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 AVPP01185 164 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 IGKV1D-12P01611 117 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 CD36P16671 472 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 ADRA2CP18825 462 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 EPHA1P21709 976 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 GALP22466 123 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 NPBWR2P48146 333 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 PITPNBP48739 271 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 SEC61A1P61619 476 aaKnown RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 FIP1L1Q6UN15 594 aaKnown RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 C1orf229Q6ZS94 237 aaPredicted RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 LRRTM1Q86UE6 522 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 ANGPTL6Q8NI99 470 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 CCL13Q99616 98 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 MRPS26Q9BYN8 205 aaKnown RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 ELL3Q9HB65 397 aaPredicted RBP12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 OR5V1Q9UGF6 321 aa12.3□□□□□ -0.44
PCOLCE-204ENST00000468214 PPIAL4CA0A0B4J2A2 164 aa12.29□□□□□ -0.44
PCOLCE-204ENST00000468214 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
PCOLCE-204ENST00000468214 TFF1P04155 84 aa12.29□□□□□ -0.44
PCOLCE-204ENST00000468214 WNT2P09544 360 aa12.29□□□□□ -0.44
PCOLCE-204ENST00000468214 PSG2P11465 335 aa12.29□□□□□ -0.44
PCOLCE-204ENST00000468214 CPT2P23786 658 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms