RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 DCDC5Q6ZRR9 648 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 USP43Q70EL4 1123 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 NR2C2APQ86WQ0 139 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 DEFB108BQ8NET1 73 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 Q8NFD4 153 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 CST11Q9H112 138 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 GLS2Q9UI32 602 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 IGHV3OR15-7A0A075B7D8 119 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 A0A0G2JK05 382 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 SMIM31A0A1B0GVY4 71 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 SMIM30A4D0T7 59 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 CCDC160A6NGH7 325 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 HTR3BO95264 441 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 GTF2F2P13984 249 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 ARSBP15848 533 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 PRKACAP17612 351 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 SERPINA2P20848 420 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 CPT2P23786 658 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 RPS19P39019 145 aaKnown RBP12.73□□□□□ -0.37
SNIP1-202ENST00000468040 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 HES5Q5TA89 166 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 STUMQ69YW2 141 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 SLC25A28Q96A46 364 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 MRPS24Q96EL2 167 aaKnown RBP12.73□□□□□ -0.37
SNIP1-202ENST00000468040 C1orf147Q96MC9 270 aaPredicted RBP12.73□□□□□ -0.37
SNIP1-202ENST00000468040 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 NDUFA13Q9P0J0 144 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 PCDHB10Q9UN67 800 aa12.73□□□□□ -0.37
SNIP1-202ENST00000468040 NKX6-3A6NJ46 265 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 GYPAP02724 150 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 HEXAP06865 529 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 USF1P22415 310 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF146Q15072 292 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 P2RY14Q15391 338 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 NLRC3Q7RTR2 1065 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 OSR2Q8N2R0 312 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 OR10K1Q8NGX5 313 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 ANGPTL6Q8NI99 470 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 KCNG3Q8TAE7 436 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 FAM3DQ96BQ1 224 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 SEH1LQ96EE3 360 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 MRI1Q9BV20 369 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
SNIP1-202ENST00000468040 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 SEBOXQ9HB31 216 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-202ENST00000468040 MIOXQ9UGB7 285 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 DAPK2Q9UIK4 370 aa12.72□□□□□ -0.37
SNIP1-202ENST00000468040 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
SNIP1-202ENST00000468040 IGHV4-61A0A0C4DH41 118 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 H3BMQ9 156 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.37
SNIP1-202ENST00000468040 CRTAPO75718 401 aaPredicted RBP12.71□□□□□ -0.37
SNIP1-202ENST00000468040 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 PSG2P11465 335 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 CAV3P56539 151 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 CLDN12P56749 244 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 IL13RA2Q14627 380 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 NHLRC3Q5JS37 347 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 ATPAF1Q5TC12 328 aaPredicted RBP12.71□□□□□ -0.37
SNIP1-202ENST00000468040 SLC36A1Q7Z2H8 476 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 OR2W3Q7Z3T1 314 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 LINC00596Q86U02 117 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 NDNFQ8TB73 568 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 RAB39BQ96DA2 213 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 NARFLQ9H6Q4 476 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF665Q9H7R5 613 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.37
SNIP1-202ENST00000468040 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
SNIP1-202ENST00000468040 IGKV1D-17A0A075B6S4 117 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 TNFRSF13BO14836 293 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 TMPRSS2O15393 492 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 ADAM20O43506 726 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 CALCBP10092 127 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 SLC2A2P11168 524 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 RPS2P15880 293 aaKnown RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 MGMTP16455 207 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms