RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PPP1R36Q96LQ0 422 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 OR2V2Q96R30 315 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 TMEM43Q9BTV4 400 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
PTCD3-207ENST00000467273 MRPL13Q9BYD1 178 aaKnown RBP4.4□□□□□ -1.71
PTCD3-207ENST00000467273 NMNAT2Q9BZQ4 307 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 PPA2Q9H2U2 334 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 WDR76Q9H967 626 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 SIAEQ9HAT2 523 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 CACYBPQ9HB71 228 aaKnown RBP4.4□□□□□ -1.71
PTCD3-207ENST00000467273 PNRC2Q9NPJ4 139 aaKnown RBP4.4□□□□□ -1.71
PTCD3-207ENST00000467273 FOXJ3Q9UPW0 622 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.71
PTCD3-207ENST00000467273 LYSTQ99698 3801 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 GMNCA6NCL1 334 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 USP17L23D6RBM5 183 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 H0YJX3 145 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 PLPP3O14495 311 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 HSPB6O14558 160 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CTDSPLO15194 276 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZSCAN12O43309 604 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 DENRO43583 198 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ANGPTL7O43827 346 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 GLRA3O75311 464 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 GPX5O75715 221 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 MT-ND1P03886 318 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 IRF2P14316 349 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 LBPP18428 481 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 EEF1B2P24534 225 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 HTR2AP28223 471 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 KCNJ3P48549 501 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZNF133P52736 654 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 BIDP55957 195 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 HIST3H3Q16695 136 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 PABPC1L2AQ5JQF8 200 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ULK3Q6PHR2 472 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZNF836Q6ZNA1 936 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 HDDC2Q7Z4H3 204 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 HMGN2P46Q86SG4 172 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 C10orf67Q8IYJ2 551 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CLECL1Q8IZS7 167 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CLEC4FQ8N1N0 589 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 Q8N2B8 174 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 KRTCAP2Q8N6L1 136 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 OR13G1Q8NGZ3 307 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 TWIST2Q8WVJ9 160 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CACNG8Q8WXS5 425 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 EMG1Q92979 244 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 TESCQ96BS2 214 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 DUS3LQ96G46 650 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 TXNDC15Q96J42 360 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZIM3Q96PE6 472 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 TECTBQ96PL2 329 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 SEPHS2Q99611 448 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 WACQ9BTA9 647 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CHRDL1Q9BU40 450 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CDCA4Q9BXL8 241 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 NPFFR1Q9GZQ6 430 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 SAV1Q9H4B6 383 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 RANGRFQ9HD47 186 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 CCNB1IP1Q9NPC3 277 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 THUMPD1Q9NXG2 353 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 RHCGQ9UBD6 479 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 RPS6KB2Q9UBS0 482 aa4.39□□□□□ -1.71
PTCD3-207ENST00000467273 FOXA2Q9Y261 457 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 ZNF443Q9Y2A4 671 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 LSM4Q9Y4Z0 139 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 DYNC2H1Q8NCM8 4307 aaKnown RBP4.39□□□□□ -1.71
PTCD3-207ENST00000467273 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 ATP8B1O43520 1251 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 OR6A2O95222 327 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 RAB3DO95716 219 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 CLIC3O95833 236 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 CYB5R3P00387 301 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-207ENST00000467273 LHBP01229 141 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 IGHG1P01857 330 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 MT-ND2P03891 347 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 IFNW1P05000 195 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 PGA4P0DJD7 388 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 PGA3P0DJD8 388 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 COX5BP10606 129 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 NR2C1P13056 603 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 ZNF44P15621 663 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 PAICSP22234 425 aaKnown RBP4.38□□□□□ -1.71
PTCD3-207ENST00000467273 SLC6A6P31641 620 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 FCGR2BP31994 310 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-207ENST00000467273 CDAP32320 146 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 CDKN2CP42773 168 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 KIR3DL2P43630 455 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 RGS6P49758 472 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 CRISP3P54108 245 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 PCBD1P61457 104 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 IFFO1Q0D2I5 559 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 FHL1Q13642 323 aa4.38□□□□□ -1.71
PTCD3-207ENST00000467273 UGT3A2Q3SY77 523 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms