RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CDH26Q8IXH8 852 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 JAGN1Q8N5M9 183 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 NKAIN3Q8N8D7 197 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 PNLDC1Q8NA58 520 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 PXT1Q8NFP0 134 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 MUL1Q969V5 352 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 FAM192AQ9GZU8 254 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 YAE1D1Q9NRH1 226 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 RBFOX1Q9NWB1 397 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
DNMT3A-208ENST00000466601 A0A1B0GW55 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 TRIM64CA6NLI5 447 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 A8MXK9 166 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 CALCBP10092 127 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 ADRA2CP18825 462 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 GALP22466 123 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 PRDX2P32119 198 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 NPY4RP50391 375 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 WDR25Q64LD2 544 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 Q71RC1 249 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 C1QL2Q7Z5L3 287 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 FAM58AQ8N1B3 248 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 TMEM186Q96B77 213 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 MED30Q96HR3 178 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 HMG20AQ9NP66 347 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 ABCA1O95477 2261 aa12.03□□□□□ -0.48
DNMT3A-208ENST00000466601 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 KIAA1324LA8MWY0 1029 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 DVL1O14640 695 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 SIGLEC5O15389 551 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 NDUFB3O43676 98 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 SFTPBP07988 381 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 JUNBP17275 347 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 PRKACAP17612 351 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 IL13RA1P78552 427 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 RSU1Q15404 277 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 GLT8D1Q68CQ7 371 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 FIP1L1Q6UN15 594 aaKnown RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 ASCL4Q6XD76 172 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 LYPD6Q86Y78 171 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 CD177Q8N6Q3 437 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 FOXRED1Q96CU9 486 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 SDSLQ96GA7 329 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 S100A13Q99584 98 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 CNTD2Q9H8S5 307 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 OR5V1Q9UGF6 321 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 KCNS2Q9ULS6 477 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 STUB1Q9UNE7 303 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 MAB21L2Q9Y586 359 aa12.02□□□□□ -0.49
DNMT3A-208ENST00000466601 A8MV72 311 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 FCN3O75636 299 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 CDRT1O95170 752 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 SMIM18P0DKX4 95 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 SELLP14151 372 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 CD36P16671 472 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 MTNR1BP49286 362 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 BMXP51813 675 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 SNU13P55769 128 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 IKZF1Q13422 519 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 DGUOKQ16854 277 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 LRRC10Q5BKY1 277 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 ZNF561Q8N587 486 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 ZNRF1Q8ND25 227 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 OR10K1Q8NGX5 313 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 EXOSC4Q9NPD3 245 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 SSR3Q9UNL2 185 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 GSTK1Q9Y2Q3 226 aa12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 MRPS28Q9Y2Q9 187 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-208ENST00000466601 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
DNMT3A-208ENST00000466601 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
DNMT3A-208ENST00000466601 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
DNMT3A-208ENST00000466601 HTR3BO95264 441 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 977.8 ms