RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 C4orf36Q96KX1 117 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 WACQ9BTA9 647 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 RBM38Q9H0Z9 239 aaKnown RBP11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 MEGF9Q9H1U4 602 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF593O00488 134 aaPredicted RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 SGCEO43556 437 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 SULT1C4O75897 302 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 CD36P16671 472 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 GTF2A1P52655 376 aaPredicted RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 GBX2P52951 348 aaPredicted RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 NCR3LG1Q68D85 454 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 ANKRD13BQ86YJ7 626 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 C8orf46Q8TAG6 207 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 ISOC1Q96CN7 298 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 YIPF6Q96EC8 236 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 ZNF649Q9BS31 505 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 FUNDC2Q9BWH2 189 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 MRPL22Q9NWU5 206 aaKnown RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 ENPP5Q9UJA9 477 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 GNG8Q9UK08 70 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 COPS3Q9UNS2 423 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.5
HMGXB4-206ENST00000466438 HUWE1Q7Z6Z7 4374 aaKnown RBP11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 J3QLW9 94 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 CPEP16870 476 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF19P17023 458 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 ALOX5APP20292 161 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 BMXP51813 675 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 GPR50Q13585 617 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 KCNMB1Q16558 191 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 PCK2Q16822 640 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 FGFRL1Q8N441 504 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF485Q8NCK3 441 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 OR2AJ1Q8NGZ0 328 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 SLC7A6Q92536 515 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 ASCL2Q99929 193 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 MROQ9BYG7 248 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 POLE4Q9NR33 117 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 IKZF2Q9UKS7 526 aa11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
HMGXB4-206ENST00000466438 METTL15A6NJ78 407 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 GABARAPO95166 117 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 HCCSP53701 268 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 TPBGQ13641 420 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 TRAM1Q15629 374 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 MEP1BQ16820 701 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 CCDC58Q4VC31 144 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 TP53I3Q53FA7 332 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 SSX6Q7RTT6 188 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 KRT77Q7Z794 578 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 YIPF7Q8N8F6 280 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 LINC00482Q8N8I6 264 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 AJUBAQ96IF1 538 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 TTTY10Q9BZA0 68 aa11.88□□□□□ -0.51
HMGXB4-206ENST00000466438 SLC22A1O15245 554 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 AIREO43918 545 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF254O75437 659 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 OR12D2P58182 307 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 DGCR2P98153 550 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 ROM1Q03395 351 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 AQP6Q13520 282 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 LIPKQ5VXJ0 399 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 RPL22L1Q6P5R6 122 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 DEGS2Q6QHC5 323 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 DCXRQ7Z4W1 244 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF679Q8IYX0 411 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 OR5AU1Q8NGC0 362 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 PIFOQ8TCI5 191 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 APOBEC3DQ96AK3 386 aaPredicted RBP11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 COQ7Q99807 217 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 PRSS22Q9GZN4 317 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 ISG20L2Q9H9L3 353 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 CYB5R1Q9UHQ9 305 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 STUB1Q9UNE7 303 aa11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 TSSC4Q9Y5U2 329 aaPredicted RBP11.87□□□□□ -0.51
HMGXB4-206ENST00000466438 OR6C6A6NF89 314 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 ZNF878C9JN71 531 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 LHBP01229 141 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 CELP19835 753 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 RPS27P42677 84 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 TGM4P49221 684 aa11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 CNN3Q15417 329 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-206ENST00000466438 SSX1Q16384 188 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms