RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 AGPAT2O15120 278 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 NDUFA2O43678 99 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 FARS2O95363 451 aaKnown RBP16.8■□□□□ 0.28
LIMS2-212ENST00000466410 NRASP01111 189 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 ZNF728P0DKX0 622 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 GLI4P10075 376 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 DTYMKP23919 212 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SULT1A2P50226 295 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SMCO1Q147U7 214 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 CLEC9AQ6UXN8 241 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 AAED1Q7RTV5 226 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SPAG16Q8N0X2 631 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 MAFAQ8NHW3 353 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-212ENST00000466410 TERTO14746 1132 aaKnown RBP16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SNAPINO95295 136 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 OR5AC1P0C628 307 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SRD5A2P31213 254 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 FOLR3P41439 243 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 ZFP36L1Q07352 338 aaKnown RBP16.8■□□□□ 0.28
LIMS2-212ENST00000466410 PDCD1Q15116 288 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 ASCL4Q6XD76 172 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 FBXL14Q8N1E6 418 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 SAV1Q9H4B6 383 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-212ENST00000466410 PRELID3BQ9Y3B1 194 aa16.8■□□□□ 0.28
LIMS2-212ENST00000466410 DNPH1O43598 174 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 PVALBP20472 110 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-212ENST00000466410 RGS19P49795 217 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 RPS18P62269 152 aaKnown RBP16.79■□□□□ 0.28
LIMS2-212ENST00000466410 TMEM42Q69YG0 159 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 LHFPL2Q6ZUX7 228 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 CPT1CQ8TCG5 803 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 RTN4IP1Q8WWV3 396 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-212ENST00000466410 ERGIC1Q969X5 290 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 RNASEK-C17orf49H0YIS7 233 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 ZNF92Q03936 586 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 TMEM187Q14656 261 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 PHLDA2Q53GA4 152 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 BTNL8Q6UX41 500 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 SGCZQ96LD1 299 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 FOXB1Q99853 325 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 WNT5BQ9H1J7 359 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 NAA60Q9H7X0 242 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 KCNIP3Q9Y2W7 256 aa16.79■□□□□ 0.28
LIMS2-212ENST00000466410 MBPP02686 304 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-212ENST00000466410 P04436 131 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 CEACAM16Q2WEN9 425 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 KRTAP27-1Q3LI81 207 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 ABCA11PQ4W5N1 156 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 SLC22A25Q6T423 547 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 LYZL2Q7Z4W2 148 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 OSR2Q8N2R0 312 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 OR10Z1Q8NGY1 313 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 BSCL2Q96G97 398 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-212ENST00000466410 JTBO76095 146 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 GAPDHP04406 335 aaKnown RBP16.78■□□□□ 0.28
LIMS2-212ENST00000466410 NFYBP25208 207 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 FAM3AP98173 230 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 Q0VFX4 171 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 OR2H1Q9GZK4 316 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 PARP12Q9H0J9 701 aaKnown RBP16.78■□□□□ 0.28
LIMS2-212ENST00000466410 ST3GAL6Q9Y274 331 aa16.78■□□□□ 0.28
LIMS2-212ENST00000466410 hCG_38984A0A1B0GV85 526 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 C9JQL5 133 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 DIRAS3O95661 229 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 SFTA3P0C7M3 94 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 WIPI1Q5MNZ9 446 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-212ENST00000466410 OR10D3Q8NH80 312 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 BCO1Q9HAY6 547 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 MLXQ9UH92 298 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 TIMM10BQ9Y5J6 103 aa16.77■□□□□ 0.28
LIMS2-212ENST00000466410 CLDN15P56746 228 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 PDZK1IP1Q13113 114 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 TRA2AQ13595 282 aaKnown RBP eCLIP16.77■□□□□ 0.27
LIMS2-212ENST00000466410 Q6ZPA2 131 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 Q6ZRG5 221 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 KCNE4Q8WWG9 221 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 SLC2A9Q9NRM0 540 aa16.77■□□□□ 0.27
LIMS2-212ENST00000466410 LRRC3CA6NJW4 275 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 TRAPPC6AO75865 159 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 CD5P06127 495 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 CD80P33681 288 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 SKA3Q8IX90 412 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 BATF2Q8N1L9 274 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 OR5L1Q8NGL2 311 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 OR11L1Q8NGX0 322 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 PIGCQ92535 297 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 GALNT14Q96FL9 552 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 PARP11Q9NR21 331 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 OR8U9P0C7N5 309 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 OTX2P32243 289 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 OR8U1Q8NH10 309 aa16.76■□□□□ 0.27
LIMS2-212ENST00000466410 ZNF587BE7ETH6 402 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 XRCC2O43543 280 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 PLCXD3Q63HM9 321 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 PPP1R32Q7Z5V6 425 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 ABHD3Q8WU67 409 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 ADGRG7Q96K78 797 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 PLEKHA2Q9HB19 425 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 DEPPQ9NTK1 212 aa16.75■□□□□ 0.27
LIMS2-212ENST00000466410 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms