RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PSG2P11465 335 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 LBPP18428 481 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 VDAC1P21796 283 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 CFL1P23528 166 aaKnown RBP4.46□□□□□ -1.7
NCL-208ENST00000466274 IL12AP29459 219 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 CENPAP49450 140 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 UCP3P55916 312 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 NME5P56597 212 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 ESRRGP62508 458 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 HIST1H3AP68431 136 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 RUNX1Q01196 453 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
NCL-208ENST00000466274 ZNF273Q14593 569 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 RSPO1Q2MKA7 263 aaPredicted RBP4.46□□□□□ -1.7
NCL-208ENST00000466274 ZIK1Q3SY52 487 aaPredicted RBP4.46□□□□□ -1.7
NCL-208ENST00000466274 ANKDD1AQ495B1 522 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 GCNT6Q5T4J0 391 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 HIST2H3PS2Q5TEC6 136 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 DNM1P34Q6PK57 102 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 KCTD8Q6ZWB6 473 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 HIST2H3AQ71DI3 136 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 RTN4RL2Q86UN3 420 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 TMEM217Q8N7C4 229 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 ZNF676Q8N7Q3 588 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 C5orf56Q8N8D9 126 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 OR4C15Q8NGM1 316 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 ZNF671Q8TAW3 534 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 TMEM239Q8WW34 195 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 ZNF799Q96GE5 643 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 UBE2E2Q96LR5 201 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 TXLNGYQ9BZA5 131 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 YY1AP1Q9H869 796 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 KIAA1456Q9P272 454 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 HHLA2Q9UM44 414 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 MED31Q9Y3C7 131 aa4.46□□□□□ -1.7
NCL-208ENST00000466274 MAGEA13PA6NCF6 341 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 H7C1C5 153 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 I3L521 148 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 PSMD9O00233 223 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 CLIC1O00299 241 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 XRCC2O43543 280 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 MTRF1O75570 445 aaKnown RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 IGHG4P01861 327 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 SHBGP04278 402 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 ABHD2P08910 425 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 ZNF823P16415 610 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 TMEM11P17152 192 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 CRABP1P29762 137 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 TCTAP57738 103 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 UFM1P61960 85 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 LCN6P62502 163 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 BDH1Q02338 343 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 HES1Q14469 280 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 RFX4Q33E94 735 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 SMIM21Q3B7S5 101 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 SLC36A3Q495N2 470 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 GTDC1Q4AE62 458 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 C6orf10Q5SRN2 563 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 GLYATL3Q5SZD4 288 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 OR52W1Q6IF63 320 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 CORO6Q6QEF8 472 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 SMARCD3Q6STE5 483 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 DRAM2Q6UX65 266 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 MSANTD1Q6ZTZ1 278 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 BCDIN3DQ7Z5W3 292 aaKnown RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 WDR86Q86TI4 376 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 NAA40Q86UY6 237 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 IZUMO1Q8IYV9 350 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 KIRREL3Q8IZU9 778 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 OR6V1Q8N148 313 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 OR6T1Q8NGN1 323 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 OR2AE1Q8NHA4 323 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 PFN4Q8NHR9 129 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 RGP1Q92546 391 aaPredicted RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 ARPC1AQ92747 370 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 RPL3LQ92901 407 aaKnown RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 DLX4Q92988 240 aaPredicted RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 VPS33AQ96AX1 596 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 ZNF714Q96N38 554 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 HIST1H2AAQ96QV6 131 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 PAPOLGQ9BWT3 736 aaKnown RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 TMEM133Q9H2Q1 129 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 SP140LQ9H930 580 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 KRCC1Q9NPI7 259 aaPredicted RBP4.45□□□□□ -1.7
NCL-208ENST00000466274 NDE1Q9NXR1 346 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 ZNF222Q9UK12 451 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 MPC1Q9Y5U8 109 aa4.45□□□□□ -1.7
NCL-208ENST00000466274 hADV38S2A0JD32 116 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 ARRDC5A6NEK1 342 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 RFPL4AA6NLU0 287 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 RFPL4AL1F8VTS6 287 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 LINC01619G3V211 115 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 TOR1AO14656 332 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 RIPK2O43353 540 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 LYPD3O95274 346 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 TK1P04183 234 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 IGF1P05019 195 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms