RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 SSX4O60224 188 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 NXPH2O95156 264 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 CYB5AP00167 134 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 PAHP00439 452 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 IGHV2-70P01814 119 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 CALCBP10092 127 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
VCP-204ENST00000466100 RORCP51449 518 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 SCAND1P57086 179 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 FGF12P61328 243 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
VCP-204ENST00000466100 ZMYND11Q15326 602 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 RSU1Q15404 277 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 SLC22A6Q4U2R8 563 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 IDNKQ5T6J7 187 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 STUMQ69YW2 141 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 OR10K2Q6IF99 312 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 OR2W3Q7Z3T1 314 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 BIVMQ86UB2 503 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 FAM58AQ8N1B3 248 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 OR51T1Q8NGJ9 327 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 OR5H6Q8NGV6 325 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 LGALS14Q8TCE9 139 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
VCP-204ENST00000466100 NXF2Q9GZY0 626 aaKnown RBP9.34□□□□□ -0.91
VCP-204ENST00000466100 HMG20AQ9NP66 347 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 RASL12Q9NYN1 266 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 ZNF222Q9UK12 451 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 CR1P17927 2039 aa9.34□□□□□ -0.91
VCP-204ENST00000466100 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 VWC2LB2RUY7 222 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 LGALS8O00214 317 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 TNFRSF13BO14836 293 aaPredicted RBP9.33□□□□□ -0.92
VCP-204ENST00000466100 ZNF780AO75290 641 aaPredicted RBP9.33□□□□□ -0.92
VCP-204ENST00000466100 CSF3P09919 207 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 IRF2P14316 349 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 ARSBP15848 533 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 MGMTP16455 207 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 AMY2BP19961 511 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 SERPINA2P20848 420 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 GLRA1P23415 457 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 BMXP51813 675 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 CAPZA1P52907 286 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 TMEM33P57088 247 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 GMFBP60983 142 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 BTG1P62324 171 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 ZNF146Q15072 292 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 SMIM21Q3B7S5 101 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 C2orf76Q3KRA6 126 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 C19orf18Q8NEA5 215 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 C10orf105Q8TEF2 133 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 EMG1Q92979 244 aaKnown RBP9.33□□□□□ -0.92
VCP-204ENST00000466100 PTX4Q96A99 478 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 SLC25A38Q96DW6 304 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 Q96M66 194 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 DCUN1D5Q9BTE7 237 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 ELL3Q9HB65 397 aaPredicted RBP9.33□□□□□ -0.92
VCP-204ENST00000466100 ABRACLQ9P1F3 81 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 WIPI2Q9Y4P8 454 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.927e-7■■■■■ 50.6
VCP-204ENST00000466100 MALRD1Q5VYJ5 2156 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 MAST4O15021 2626 aa9.33□□□□□ -0.92
VCP-204ENST00000466100 IGKV1D-17A0A075B6S4 117 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PPIAL4EA0A075B759 164 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 IGHV3OR15-7A0A075B7D8 119 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PPIAL4DF5H284 164 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 ZNF205O95201 554 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 HTR3BO95264 441 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 KNG1P01042 644 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PPIAL4FP0DN26 164 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PSG2P11465 335 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 GTF2F2P13984 249 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 MUC1P15941 1255 aaPredicted RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 PRKACAP17612 351 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 RAB6AP20340 208 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 RANBP1P43487 201 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PDLIM4P50479 330 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 EFNB2P52799 333 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 RPS27AP62979 156 aaKnown RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 GPR176Q14439 515 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 IL13RA2Q14627 380 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 CNPY1Q3B7I2 92 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PIGYQ3MUY2 71 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 ZNF404Q494X3 552 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 SPIN3Q5JUX0 258 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 Q6P435 159 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 LRRC28Q86X40 367 aaPredicted RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 BOLLQ8N9W6 283 aaKnown RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 ANGPTL6Q8NI99 470 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 KCNG3Q8TAE7 436 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 FAM46BQ96A09 425 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 S100A13Q99584 98 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms