RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR2A4O95047 310 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 CRYGCP07315 174 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 RHOCP08134 193 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 PTHLHP12272 177 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 ARR3P36575 388 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 P2RY2P41231 377 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 ATP6AP1LQ52LC2 224 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 CLLU1OSQ5K130 101 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 ZNF660Q6AZW8 331 aaPredicted RBP1.92□□□□□ -2.1
LRCH3-211ENST00000466054 ZNF470Q6ECI4 717 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 C16orf87Q6PH81 154 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 SMARCD3Q6STE5 483 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 RPRMLQ8N4K4 120 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 LINC00337Q8N6G1 96 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 NDNFQ8TB73 568 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 UBA3Q8TBC4 463 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 ZCCHC13Q8WW36 166 aaKnown RBP1.92□□□□□ -2.1
LRCH3-211ENST00000466054 KIAA1143Q96AT1 154 aaPredicted RBP1.92□□□□□ -2.1
LRCH3-211ENST00000466054 OR2A7Q96R45 310 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 METTL26Q96S19 204 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 GAL3ST2Q9H3Q3 398 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 TMEM38BQ9NVV0 291 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 TAC3Q9UHF0 121 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 FLVCR2Q9UPI3 526 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 KLF13Q9Y2Y9 288 aaPredicted RBP1.92□□□□□ -2.1
LRCH3-211ENST00000466054 INSIG2Q9Y5U4 225 aa1.92□□□□□ -2.1
LRCH3-211ENST00000466054 BAZ1BQ9UIG0 1483 aaKnown RBP1.92□□□□□ -2.1
LRCH3-211ENST00000466054 H3BQ85 93 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 RNF113AO15541 343 aaKnown RBP1.91□□□□□ -2.1
LRCH3-211ENST00000466054 KDELR3O43731 214 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 GMDSO60547 372 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 IFFO1Q0D2I5 559 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 ENDOGQ14249 297 aaKnown RBP1.91□□□□□ -2.1
LRCH3-211ENST00000466054 CLEC12AQ5QGZ9 265 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 LIN9Q5TKA1 542 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 TMEM144Q7Z5S9 345 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 NELFCDQ8IXH7 590 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 C3orf22Q8N5N4 141 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 CCNYL1Q8N7R7 359 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 ZNF321PQ8N8H1 164 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 RBPMSQ93062 196 aaKnown RBP1.91□□□□□ -2.1
LRCH3-211ENST00000466054 SHCBP1LQ9BZQ2 653 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 ACOT9Q9Y305 439 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 TRAPPC1Q9Y5R8 145 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 ZNF780BQ9Y6R6 833 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 VWA8A3KMH1 1905 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 SPATA31E1Q6ZUB1 1445 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 SSH2Q76I76 1423 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 KIF27Q86VH2 1401 aa1.91□□□□□ -2.1
LRCH3-211ENST00000466054 K7EPK0 472 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 UPK2O00526 184 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 PRMT5O14744 637 aaPredicted RBP1.9□□□□□ -2.11
LRCH3-211ENST00000466054 RGS5O15539 181 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 OTCP00480 354 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 CD9P21926 228 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 GPR4P46093 362 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 KLF3P57682 345 aaPredicted RBP1.9□□□□□ -2.11
LRCH3-211ENST00000466054 IL5RAQ01344 420 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 TAL2Q16559 108 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 ZNF404Q494X3 552 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 PYDC2Q56P42 97 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 PDZD11Q5EBL8 140 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 WDR59Q6PJI9 974 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 UGT2A3Q6UWM9 527 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 PRNTQ86SH4 94 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 COMTD1Q86VU5 262 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 ACTL9Q8TC94 416 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 BCL7BQ9BQE9 202 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 CHID1Q9BWS9 393 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 SRRQ9GZT4 340 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 CHRNA10Q9GZZ6 450 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 SLC38A1Q9H2H9 487 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 PRORYQ9H606 182 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 C12orf4Q9NQ89 552 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 DDIT4Q9NX09 232 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 MCTS1Q9ULC4 181 aaKnown RBP1.9□□□□□ -2.11
LRCH3-211ENST00000466054 V9GYY9 64 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 CACNA1DQ01668 2161 aa1.9□□□□□ -2.11
LRCH3-211ENST00000466054 TRAV8-7A0A075B6U6 113 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 IGKV1OR2-108A0A075B7D4 117 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 GSTTP1A0A1W2PQM5 241 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 OR2AT4A6NND4 320 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 ENTPD6O75354 484 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 CPSF4O95639 269 aaKnown RBP1.89□□□□□ -2.11
LRCH3-211ENST00000466054 IGHV3-53P01767 116 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 STAG3L2P0CL84 134 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 CPN2P22792 545 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 FOXA1P55317 472 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 TNFRSF9Q07011 255 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 DYNC1I2Q13409 638 aaKnown RBP1.89□□□□□ -2.11
LRCH3-211ENST00000466054 SLC9A3R2Q15599 337 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 SSX1Q16384 188 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 NDUFAF6Q330K2 333 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 TCF24Q7RTU0 167 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 CPNE9Q8IYJ1 553 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 LY6G5BQ8NDX9 201 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 OR13C9Q8NGT0 318 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 TNFRSF14Q92956 283 aa1.89□□□□□ -2.11
LRCH3-211ENST00000466054 CIDECQ96AQ7 238 aaPredicted RBP1.89□□□□□ -2.11
LRCH3-211ENST00000466054 QKIQ96PU8 341 aaKnown RBP eCLIP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms