RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 LRRC29Q8WV35 223 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 OR5P3Q8WZ94 311 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PIGCQ92535 297 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 TAF15Q92804 592 aaKnown RBP eCLIP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 STMN2Q93045 179 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 RAB39BQ96DA2 213 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 LGALS12Q96DT0 336 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM71F1Q96KD3 344 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF488Q96MN9 340 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PAPOLGQ9BWT3 736 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 MROQ9BYG7 248 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 TLNRD1Q9H1K6 362 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 SP140LQ9H930 580 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ISG20L2Q9H9L3 353 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ESM1Q9NQ30 184 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 ACOXLQ9NUZ1 547 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM118AQ9NWS6 357 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 NKX1-2Q9UD57 310 aaPredicted RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 WARS2Q9UGM6 360 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 IKZF2Q9UKS7 526 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 GTF2A1LQ9UNN4 478 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PIGLQ9Y2B2 252 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 PPIAL4AQ9Y536 164 aa3.96□□□□□ -1.78
EXOSC3-204ENST00000465860 FBN3Q75N90 2809 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 IGKV1-27A0A075B6S5 117 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 LOC100130705A0A1B0GUX0 176 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ERICH4A6NGS2 130 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 METTL15A6NJ78 407 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SRRM5B3KS81 715 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 E9PI62 339 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF670-ZNF695F2Z2N8 137 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 F8VVB4 439 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 F8VWA3 439 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 H0YHG0 523 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 LGALS8O00214 317 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SYNGR1O43759 233 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 BAG2O95816 211 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 CST4P01036 141 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SFTPBP07988 381 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 GNAO1P09471 354 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 IGHV4-38-2P0DP08 117 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ANPEPP15144 967 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 RPS2P15880 293 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 DDOSTP39656 456 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 MTNR1AP48039 350 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 PITPNBP48739 271 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 CEBPDP49716 269 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 RIDAP52758 137 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ADARB1P78563 741 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 PAX8Q06710 450 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SLC3A1Q07837 685 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 RCN1Q15293 331 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 UBE2V2Q15819 145 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM76BQ5HYJ3 339 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 WDR38Q5JTN6 314 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SLC25A30Q5SVS4 291 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 DCAF12L2Q5VW00 463 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 WDR25Q64LD2 544 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 TMEM42Q69YG0 159 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 XAF1Q6GPH4 301 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 DEGS2Q6QHC5 323 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ZBTB49Q6ZSB9 765 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 Q6ZSR3 168 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 LHFPL3Q86UP9 236 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM216BQ8N7L0 139 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 CSNK2A3Q8NEV1 391 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 OR51A4Q8NGJ6 313 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 OR8S1Q8NH09 359 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 CNIH3Q8TBE1 160 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 NPRL2Q8WTW4 380 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 ASB17Q8WXJ9 295 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 RNFT2Q96EX2 444 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 C1orf147Q96MC9 270 aaPredicted RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 CCL13Q99616 98 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SLC6A7Q99884 636 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 C9orf16Q9BUW7 83 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 TEX12Q9BXU0 123 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 SLC22A4Q9H015 551 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 OR51I2Q9H344 312 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 OPA3Q9H6K4 179 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 FN3KRPQ9HA64 309 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 GPR173Q9NS66 373 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 GAR1Q9NY12 217 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 OR52A1Q9UKL2 312 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 EXOGQ9Y2C4 368 aaKnown RBP3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 GMPPBQ9Y5P6 360 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 INSIG2Q9Y5U4 225 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 R4GMQ9 66 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 V9GYS6 101 aa3.95□□□□□ -1.78
EXOSC3-204ENST00000465860 VWFP04275 2813 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 KIAA2026Q5HYC2 2103 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 IGKV1D-17A0A075B6S4 117 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 IGHV2-70DA0A0C4DH43 119 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms