RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CD8AP01732 235 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 PFN1P07737 140 aaKnown RBP1.71□□□□□ -2.14
SMC4-205ENST00000465563 RHOCP08134 193 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 SEC11BP0C7V7 166 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 PTNP21246 168 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 CD9P21926 228 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 RGS6P49758 472 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 LAMTOR4Q0VGL1 99 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 WDR43Q15061 677 aaKnown RBP eCLIP1.71□□□□□ -2.14
SMC4-205ENST00000465563 PMVKQ15126 192 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 CEACAM16Q2WEN9 425 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 MRPL2Q5T653 305 aaKnown RBP1.71□□□□□ -2.14
SMC4-205ENST00000465563 SYT6Q5T7P8 510 aaPredicted RBP1.71□□□□□ -2.14
SMC4-205ENST00000465563 ZFAND6Q6FIF0 208 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 NELFCDQ8IXH7 590 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 OR6N2Q8NGY6 317 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 PHOSPHO2Q8TCD6 241 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 RILPQ96NA2 401 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 PEBP4Q96S96 227 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 KLF6Q99612 283 aaPredicted RBP1.71□□□□□ -2.14
SMC4-205ENST00000465563 SEC22CQ9BRL7 303 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 PORCNQ9H237 461 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 ANKHQ9HCJ1 492 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 C12orf4Q9NQ89 552 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 ZNF302Q9NR11 478 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 TMEM38BQ9NVV0 291 aa1.71□□□□□ -2.14
SMC4-205ENST00000465563 BZW2Q9Y6E2 419 aaKnown RBP1.71□□□□□ -2.14
SMC4-205ENST00000465563 BOLA2-SMG1P6H3BVE0 249 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ZMPSTE24O75844 475 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 SC5DO75845 299 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 GPR4P46093 362 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 PSMB2P49721 201 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 IL5RAQ01344 420 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 VAMP3Q15836 100 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ZNF404Q494X3 552 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ACTL10Q5JWF8 245 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 WDR59Q6PJI9 974 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 FAM231DQ6ZW35 169 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ITPRIPQ8IWB1 547 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 SGPP2Q8IWX5 399 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ZNF680Q8NEM1 530 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ITLN2Q8WWU7 325 aaPredicted RBP1.7□□□□□ -2.14
SMC4-205ENST00000465563 YIPF6Q96EC8 236 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ADTRPQ96IZ2 230 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 SMIM8Q96KF7 97 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 METTL26Q96S19 204 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 UTP23Q9BRU9 249 aaKnown RBP1.7□□□□□ -2.14
SMC4-205ENST00000465563 SLC38A1Q9H2H9 487 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 TRIM45Q9H8W5 580 aaPredicted RBP1.7□□□□□ -2.14
SMC4-205ENST00000465563 RMND1Q9NWS8 449 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 ZNF492Q9P255 531 aa1.7□□□□□ -2.14
SMC4-205ENST00000465563 DOCK6Q96HP0 2047 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 OR2AT4A6NND4 320 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 E7EWF7 191 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 FFAR1O14842 300 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 RNF113AO15541 343 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 KCNK2O95069 426 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 IGHG2P01859 326 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 SNRPAP09012 282 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 PSMD8P48556 350 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 RPL10AP62906 217 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 CLEC12AQ5QGZ9 265 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 C6orf183Q5T699 404 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 FAHD1Q6P587 224 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 TRMT10CQ7L0Y3 403 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 ADM2Q7Z4H4 148 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 CYP4Z2PQ8N1L4 340 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 ZDHHC22Q8N966 263 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 OR4D6Q8NGJ1 314 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 OR4C13Q8NGP0 309 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 UBA3Q8TBC4 463 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 LGALS14Q8TCE9 139 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 SHANK2-AS3Q9BTD1 123 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 MRPL20Q9BYC9 149 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 API5Q9BZZ5 524 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 ABCB9Q9NP78 766 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 ACOT13Q9NPJ3 140 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 PARP11Q9NR21 331 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 VAPAQ9P0L0 249 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 ANXA10Q9UJ72 324 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 SLC22A7Q9Y694 548 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 R4GN34 69 aa1.69□□□□□ -2.14
SMC4-205ENST00000465563 BAZ1BQ9UIG0 1483 aaKnown RBP1.69□□□□□ -2.14
SMC4-205ENST00000465563 IGKV1OR2-108A0A075B7D4 117 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 A0A1B0GXF2 115 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 OR6C70A6NIJ9 312 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 C4orf51C9J302 202 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 K7EPK0 472 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 DHRS3O75911 302 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 OR2A4O95047 310 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 IVLP07476 585 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 ZNF35P13682 527 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 HRES1P13985 223 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 HLA-DMAP28067 261 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 TUFMP49411 452 aaKnown RBP1.68□□□□□ -2.14
SMC4-205ENST00000465563 ELOCQ15369 112 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 GUSBP1Q15486 140 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 TNXAQ16473 311 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 C18orf21Q32NC0 220 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms