RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 NLKQ9UBE8 527 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 AUP1Q9Y679 476 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 A0A1W2PPK0 400 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 TRAPPC2LH3BP13 241 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 TNFRSF13BO14836 293 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-205ENST00000465238 INMTO95050 263 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SEC61A1P61619 476 aaKnown RBP14.71□□□□□ -0.05
COL7A1-205ENST00000465238 GNB2P62879 340 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 UBA52P62987 128 aaKnown RBP14.71□□□□□ -0.05
COL7A1-205ENST00000465238 PDZK1IP1Q13113 114 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 TUSC1Q2TAM9 212 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SMIM21Q3B7S5 101 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 KCTD21Q4G0X4 260 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 ACSM3Q53FZ2 586 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 ZNF529Q6P280 563 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 ZNF773Q6PK81 442 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 ACP7Q6ZNF0 438 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SLC36A1Q7Z2H8 476 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SATL1Q86VE3 508 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SPARTQ8N0X7 666 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SLAMF9Q96A28 289 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 RFT1Q96AA3 541 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 ORAI1Q96D31 301 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 CEP19Q96LK0 163 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 GPER1Q99527 375 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 CCL13Q99616 98 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 NRIP2Q9BQI9 281 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 SSBP3Q9BWW4 388 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-205ENST00000465238 TMEM138Q9NPI0 162 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 CLN8Q9UBY8 286 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 NUP50Q9UKX7 468 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 INSIG2Q9Y5U4 225 aa14.71□□□□□ -0.05
COL7A1-205ENST00000465238 TRBV5-7A0A0A0MS05 114 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 NKX6-3A6NJ46 265 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 OR2AT4A6NND4 320 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 TMPRSS2O15393 492 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 SPRY1O43609 319 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-205ENST00000465238 GPX5O75715 221 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 CPEP16870 476 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 BDKRB2P30411 391 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 TRAM1Q15629 374 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 KISS1Q15726 138 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 ATPAF1Q5TC12 328 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-205ENST00000465238 STUMQ69YW2 141 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 ASPHD2Q6ICH7 369 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 BATF2Q8N1L9 274 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 OR51A2Q8NGJ7 313 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 DERL3Q96Q80 235 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 MRI1Q9BV20 369 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 DNTTIP1Q9H147 329 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 MTCH1Q9NZJ7 389 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 KAAG1Q9UBP8 84 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 OR5V1Q9UGF6 321 aa14.7□□□□□ -0.06
COL7A1-205ENST00000465238 PKD1L1Q8TDX9 2849 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 ALDOBP05062 364 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 TMEM225BP0DP42 221 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 IGFBP3P17936 291 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-205ENST00000465238 PSMA1P25786 263 aaKnown RBP14.69□□□□□ -0.06
COL7A1-205ENST00000465238 GABRA2P47869 451 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 NPY4RP50391 375 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 ERVK11-1P61568 191 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 AWAT1Q58HT5 328 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 WDR25Q64LD2 544 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-205ENST00000465238 UNQ9370/PRO34162Q6UXP9 181 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 RNF144BQ7Z419 303 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 CEACAM19Q7Z692 300 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 Q8IYB0 196 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 SIGLECL1Q8N7X8 197 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 OR5D18Q8NGL1 313 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 ANGPTL6Q8NI99 470 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 FCGR1BQ92637 280 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 TMEM203Q969S6 136 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 MED30Q96HR3 178 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 ZMAT3Q9HA38 289 aaKnown RBP14.69□□□□□ -0.06
COL7A1-205ENST00000465238 NOX4Q9NPH5 578 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 CTSZQ9UBR2 303 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 FOXJ3Q9UPW0 622 aa14.69□□□□□ -0.06
COL7A1-205ENST00000465238 TNFAIP8O95379 198 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 PSG2P11465 335 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 FSTP19883 344 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 RPS25P62851 125 aaKnown RBP14.68□□□□□ -0.06
COL7A1-205ENST00000465238 FOXL1Q12952 345 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 KLF17Q5JT82 389 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-205ENST00000465238 DDI2Q5TDH0 399 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 UBE2UQ5VVX9 321 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 ZNF841Q6ZN19 808 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 SAXO1Q8IYX7 474 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 OR52N4Q8NGI2 321 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 HES4Q9HCC6 221 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 ZNF69Q9UC07 566 aa14.68□□□□□ -0.06
COL7A1-205ENST00000465238 TRAV8-7A0A075B6U6 113 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 RFPL4AA6NLU0 287 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 RFPL4AL1F8VTS6 287 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 DVL1O14640 695 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 PIN1P1O15428 100 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 NDUFB3O43676 98 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 ANGPTL7O43827 346 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 MAS1P04201 325 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 HKR1P10072 659 aa14.67□□□□□ -0.06
COL7A1-205ENST00000465238 AMY2BP19961 511 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms