RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TVP23CQ96ET8 276 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 LIN37Q96GY3 246 aaPredicted RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 CDCA3Q99618 268 aaPredicted RBP6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BNQ99877 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 HIST1H2BMQ99879 126 aa6.37□□□□□ -1.39
USP48-206ENST00000464577 IGLV3-32A0A0A0MS00 114 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 ZNF732B4DXR9 585 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 E9PLN8 166 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 ST8SIA5O15466 376 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 HSPA12AO43301 675 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 SCAF4O95104 1147 aaKnown RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 IGLV3-19P01714 112 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 CXCL1P09341 107 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 RD3LP0DJH9 198 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 NR2C1P13056 603 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 PAX1P15863 534 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 DRD1P21728 446 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 GABRR1P24046 479 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 ATP6V0CP27449 155 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 RNF4P78317 190 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 NKX6-1P78426 367 aaPredicted RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 CCL20P78556 96 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 DLK1P80370 383 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 MFAP5Q13361 173 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 ICAM4Q14773 271 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 SP6Q3SY56 376 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 SPNS3Q6ZMD2 512 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 ZNF429Q86V71 674 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 C17orf82Q86X59 251 aaPredicted RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 CARFQ8N187 725 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 FBXL14Q8N1E6 418 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 OR2C3Q8N628 320 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 PLPP5Q8NEB5 264 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 OR52M1Q8NGK5 317 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 OR10D4PQ8NGN7 298 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 M1APQ8TC57 530 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 NPRL2Q8WTW4 380 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 MOB3AQ96BX8 217 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 RBMXL1Q96E39 390 aaKnown RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 OXGR1Q96P68 337 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 HDHD3Q9BSH5 251 aaPredicted RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 VN1R1Q9GZP7 353 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 SLC2A9Q9NRM0 540 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 SDHAF3Q9NRP4 125 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 AK3Q9UIJ7 227 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 VDAC3Q9Y277 283 aa6.36□□□□□ -1.39
USP48-206ENST00000464577 PTRH2Q9Y3E5 179 aaKnown RBP6.36□□□□□ -1.39
USP48-206ENST00000464577 ATG2BQ96BY7 2078 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 LOC102725191A0A1B0GVB3 256 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF726A6NNF4 738 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF850A8MQ14 1090 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF727A8MUV8 499 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 H3BML4 177 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 EFNA2O43921 213 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 HBE1P02100 147 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 QDPRP09417 244 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 CEACAM1P13688 526 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF41P51814 821 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 FBXW4P57775 412 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ERVFRD-1P60508 538 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 PLPPR5Q32ZL2 321 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TMEM176BQ3YBM2 270 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 KHDC3LQ587J8 217 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SLC22A25Q6T423 547 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 FOXL2NBQ6ZUU3 175 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 FAM185AQ8N0U4 392 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR5L2Q8NGL0 311 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR5R1Q8NH85 324 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TOMM40LQ969M1 308 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SPSB1Q96BD6 273 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 GNPNAT1Q96EK6 184 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 KLHDC7BQ96G42 594 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SPIN2AQ99865 258 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SPIN2BQ9BPZ2 258 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 PIGQQ9BRB3 760 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 NIPSNAP3BQ9BS92 247 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SLC25A31Q9H0C2 315 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 METTL9Q9H1A3 318 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 ELL3Q9HB65 397 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF160Q9HCG1 818 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 HS3ST3B1Q9Y662 390 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ADAMTS9Q9P2N4 1935 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 PCNX3Q9H6A9 2034 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 CCDC187A0A096LP49 1063 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 IGSF23A1L1A6 192 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 C5orf63A6NC05 138 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR5H15A6NDH6 313 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR5H1A6NKK0 313 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TRDCB7Z8K6 153 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TSTD3H0UI37 97 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 H0YL77 283 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SLC31A2O15432 143 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SOD3P08294 240 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 MMP9P14780 707 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 FAHP16930 419 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 KLK2P20151 261 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 DDTP30046 118 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OTX1P32242 354 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms