RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 C20orf24Q9BUV8 137 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 SCRT1Q9BWW7 348 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 SMIM3Q9BZL3 60 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 OR8D2Q9GZM6 311 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 METTL9Q9H1A3 318 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 TCEAL2Q9H3H9 227 aaPredicted RBP6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF286AQ9HBT8 521 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 IL23AQ9NPF7 189 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 PNO1Q9NRX1 252 aaKnown RBP6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM74BQ9NUR3 256 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF701Q9NV72 531 aaPredicted RBP6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 PLEKHJ1Q9NW61 149 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 KLHL13Q9P2N7 655 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 SERGEFQ9UGK8 458 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 AK3Q9UIJ7 227 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF391Q9UJN7 358 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 WSB1Q9Y6I7 421 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 V9GYS6 101 aa6.3□□□□□ -1.4
CLSTN1-204ENST00000464286 TRBV23OR9-2A0A075B6M9 112 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A087WZY1 265 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 LINC01553A4QN01 128 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF726A6NNF4 738 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF850A8MQ14 1090 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF724A8MTY0 619 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PRAMEF26H0Y7S4 382 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 HRKO00198 91 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CYB5BO43169 146 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 KCNAB3O43448 404 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 YIF1AO95070 293 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 SCAF4O95104 1147 aaKnown RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 DIRAS3O95661 229 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CYB5R3P00387 301 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CLPSP04118 112 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 IGKV3-11P04433 115 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 HPNP05981 417 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 SRP19P09132 144 aaKnown RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 SERPINA2P20848 420 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 WASP42768 502 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 OR3A4PP47883 348 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 RND2P52198 227 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PIGPP57054 158 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 LSM6P62312 80 aaKnown RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 EWSR1Q01844 656 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 NHLH2Q02577 135 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 HHEXQ03014 270 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 POU3F1Q03052 451 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 IL24Q13007 206 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CHAF1BQ13112 559 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM187Q14656 261 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ELOBQ15370 118 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 KISS1Q15726 138 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ACOT6Q3I5F7 207 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 C1orf189Q5VU69 101 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM182Q6ZP80 229 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 DPPA2Q7Z7J5 298 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 WDR5BQ86VZ2 330 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM183AQ8IXX5 376 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 H1FOOQ8IZA3 346 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF283Q8N7M2 679 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 HSD17B11Q8NBQ5 300 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 NOXO1Q8NFA2 376 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 SLC37A2Q8TED4 501 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PTPMT1Q8WUK0 201 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ROBO4Q8WZ75 1007 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 HAS2Q92819 552 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TSLPQ969D9 159 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 IL22RA2Q969J5 263 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 SPTSSAQ969W0 71 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 TSACCQ96A04 125 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PGAM5Q96HS1 289 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 C18orf12Q96KH6 178 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PACRGQ96M98 296 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 C1orf147Q96MC9 270 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 DEFB118Q96PH6 123 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 OR5B12Q96R08 314 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 ACTR3CQ9C0K3 210 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 WNT10AQ9GZT5 417 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 PTGES2Q9H7Z7 377 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A0A6YYD4 124 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 LOC102725191A0A1B0GVB3 256 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 OR2W5A6NFC9 320 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 LILRA5A6NI73 299 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 FOXI3A8MTJ6 420 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 C5orf67F2Z3F1 127 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MS4A18H0YCH9 400 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HSD17B6O14756 317 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 GEMIN2O14893 280 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms