RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 B9D2Q9BPU9 175 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 GPR61Q9BZJ8 451 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 FAM107BQ9H098 131 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 SEBOXQ9HB31 216 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-210ENST00000464078 INPP5EQ9NRR6 644 aa13.82□□□□□ -0.2
HMGN1-210ENST00000464078 hADV38S2A0JD32 116 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 MEX3AA1L020 520 aaKnown RBP13.81□□□□□ -0.2
HMGN1-210ENST00000464078 CLIC3O95833 236 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 VSIG8P0DPA2 414 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 OSMP13725 252 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 MNAT1P51948 309 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
HMGN1-210ENST00000464078 CENPVQ7Z7K6 275 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-210ENST00000464078 ELMOD2Q8IZ81 293 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 BATF2Q8N1L9 274 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 ZNF676Q8N7Q3 588 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 OR4P4Q8NGL7 312 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 OR14K1Q8NGZ2 314 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 NDNFQ8TB73 568 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 CLEC7AQ9BXN2 247 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 SLC25A19Q9HC21 320 aa13.81□□□□□ -0.2
HMGN1-210ENST00000464078 A0A1B0GTI1 187 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 TMEM82A0PJX8 343 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 CCDC182A6NF36 153 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 E9PQ18 207 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 LOC110117498-PIK3R3F6TDL0 507 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 HTR1DP28221 377 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 CD69Q07108 199 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 BCL2L15Q5TBC7 163 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 LINC00482Q8N8I6 264 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 SNX22Q96L94 193 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 CEP19Q96LK0 163 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 MTCH1Q9NZJ7 389 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 IKZF2Q9UKS7 526 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 COPS3Q9UNS2 423 aa13.8□□□□□ -0.2
HMGN1-210ENST00000464078 F8VVB4 439 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 F8VWA3 439 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 CST1P01037 141 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 MRPL3P09001 348 aaKnown RBP13.79□□□□□ -0.2
HMGN1-210ENST00000464078 CCL1P22362 96 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 ESRRGP62508 458 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 MS4A2Q01362 244 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 DCTN2Q13561 401 aaKnown RBP13.79□□□□□ -0.2
HMGN1-210ENST00000464078 TMEM179BQ7Z7N9 219 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 ANGPTL5Q86XS5 388 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 CNN2Q99439 309 aaKnown RBP13.79□□□□□ -0.2
HMGN1-210ENST00000464078 R4GMQ9 66 aa13.79□□□□□ -0.2
HMGN1-210ENST00000464078 OR2F2O95006 317 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 BRS3P32247 399 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 BDH1Q02338 343 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 ZNF322Q6U7Q0 402 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-210ENST00000464078 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 DPF1Q92782 380 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 SLC25A33Q9BSK2 321 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 CHID1Q9BWS9 393 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
HMGN1-210ENST00000464078 TTTY10Q9BZA0 68 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 OR52A1Q9UKL2 312 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 GTF2A1LQ9UNN4 478 aa13.78□□□□□ -0.2
HMGN1-210ENST00000464078 DCTN3O75935 186 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 AMY1AP04745 511 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 AMY2AP04746 511 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 LPLP06858 475 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 HOXB6P17509 224 aaKnown RBP13.77□□□□□ -0.21
HMGN1-210ENST00000464078 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-210ENST00000464078 ARHGDIBP52566 201 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 ABCA11PQ4W5N1 156 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 ASB9Q96DX5 294 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 RBM14Q96PK6 669 aaKnown RBP13.77□□□□□ -0.21
HMGN1-210ENST00000464078 MNTQ99583 582 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 DPM3Q9P2X0 92 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 SLC7A11Q9UPY5 501 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 ARL2BPQ9Y2Y0 163 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 SNX5Q9Y5X3 404 aa13.77□□□□□ -0.21
HMGN1-210ENST00000464078 IGKV1-27A0A075B6S5 117 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 M0QZK8 103 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 HAND1O96004 215 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 IGLV1-47P01700 117 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ANXA8P13928 327 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 PEX2P28328 305 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ERP29P30040 261 aaKnown RBP13.76□□□□□ -0.21
HMGN1-210ENST00000464078 CXCR4P61073 352 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ACTR3P61158 418 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ZNF91Q05481 1191 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 GRK1Q15835 563 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 SNAPC1Q16533 368 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 SLX4IPQ5VYV7 408 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 TMEM236Q5W0B7 351 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 OR52W1Q6IF63 320 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 C10orf99Q6UWK7 81 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 RTN4RL2Q86UN3 420 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms