RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 IL24Q13007 206 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 TBCEQ15813 527 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-210ENST00000462125 UBE2V2Q15819 145 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 FDX2Q6P4F2 183 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 CALHM1Q8IU99 346 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 CLVS1Q8IUQ0 354 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-210ENST00000462125 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 ZNF561Q8N587 486 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 CD177Q8N6Q3 437 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 TBC1D15Q8TC07 691 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 RAB2BQ8WUD1 216 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 APH1BQ8WW43 257 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 SSMEM1Q8WWF3 244 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 ZNF488Q96MN9 340 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 PKIBQ9C010 78 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 FKBP14Q9NWM8 211 aa10.84□□□□□ -0.67
C9orf3-210ENST00000462125 EXOGQ9Y2C4 368 aaKnown RBP10.84□□□□□ -0.67
C9orf3-210ENST00000462125 ISG15P05161 165 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 UBE2E1P51965 193 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 FUT6P51993 359 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 ACTC1P68032 377 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 ACTA1P68133 377 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 SMIM21Q3B7S5 101 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 TP53I3Q53FA7 332 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 XAF1Q6GPH4 301 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 ANGPTL5Q86XS5 388 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 OR2G2Q8NGZ5 317 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■■■□ 22
C9orf3-210ENST00000462125 RNFT2Q96EX2 444 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 CHIAQ9BZP6 476 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 CHST5Q9GZS9 411 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 SLITRK2Q9H156 845 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 METTL8Q9H825 291 aaKnown RBP10.83□□□□□ -0.68
C9orf3-210ENST00000462125 SIRT7Q9NRC8 400 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 GNG8Q9UK08 70 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 SLC7A11Q9UPY5 501 aa10.83□□□□□ -0.68
C9orf3-210ENST00000462125 CAB39Q9Y376 341 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-210ENST00000462125 RPL36Q9Y3U8 105 aaKnown RBP10.83□□□□□ -0.68
C9orf3-210ENST00000462125 A0A1B0GUS0 222 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 DAPL1A0PJW8 107 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 NDUFA7O95182 113 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 SERPINA3P01011 423 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 CDK1P06493 297 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 HTR1AP08908 422 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 UBCP0CG48 685 aaKnown RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 KIR3DL2P43630 455 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 CCR9P51686 369 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 ACSM1Q08AH1 577 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 ODF4Q2M2E3 257 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 SYT6Q5T7P8 510 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 TMEM244Q5VVB8 128 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 NCR3LG1Q68D85 454 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 FIP1L1Q6UN15 594 aaKnown RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 AHSA2Q719I0 299 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 PDZD9Q8IXQ8 264 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 RDH10Q8IZV5 341 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 STX19Q8N4C7 294 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 C11orf42Q8N5U0 333 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 ACBD7Q8N6N7 88 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 TMEM185AQ8NFB2 350 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 PP6455Q8WZ26 134 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 DYRK2Q92630 601 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 ISOC1Q96CN7 298 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 SEBOXQ9HB31 216 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 ELL3Q9HB65 397 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 PAK1IP1Q9NWT1 392 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-210ENST00000462125 MTCH1Q9NZJ7 389 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
C9orf3-210ENST00000462125 IGKV1-27A0A075B6S5 117 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 FAM230AA0A1W2PPH8 454 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 A0A1W2PQ09 198 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 NPFFO15130 113 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 GATBO75879 557 aaKnown RBP10.81□□□□□ -0.68
C9orf3-210ENST00000462125 NXPH2O95156 264 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 KNG1P01042 644 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 MT-ND2P03891 347 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 TK1P04183 234 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 CRYBA1P05813 215 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 MDKP21741 143 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-210ENST00000462125 DLX1P56177 255 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 OR12D2P58182 307 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 NANOS3P60323 173 aaKnown RBP10.81□□□□□ -0.68
C9orf3-210ENST00000462125 RELBQ01201 579 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 EMX1Q04741 257 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-210ENST00000462125 LSAMPQ13449 338 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 UBE2UQ5VVX9 321 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 GPR107Q5VW38 600 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 RNLSQ5VYX0 342 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 TMEM200BQ69YZ2 307 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 HCP5Q6MZN7 132 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 FAM220AQ7Z4H9 259 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 DNAAF1Q8NEP3 725 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 OR5D13Q8NGL4 314 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 FAM234AQ9H0X4 552 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 DPAGT1Q9H3H5 408 aa10.81□□□□□ -0.68
C9orf3-210ENST00000462125 PLEKHA1Q9HB21 404 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms