RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 HIST1H3AP68431 136 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 PMP22Q01453 160 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ARFRP1Q13795 201 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SLC9A3R2Q15599 337 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 KISS1Q15726 138 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 GFOD2Q3B7J2 385 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 HIST2H3PS2Q5TEC6 136 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 EIF5AL1Q6IS14 154 aaKnown RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF585AQ6P3V2 769 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 PLXDC2Q6UX71 529 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 HIST2H3AQ71DI3 136 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 FAM57BQ71RH2 274 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SPAG16Q8N0X2 631 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF837Q96EG3 531 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 OR10C1Q96KK4 312 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 PECRQ9BY49 303 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ACKR4Q9NPB9 350 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 DMXL2Q8TDJ6 3036 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 MGAQ8IWI9 3026 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 DHHO43323 396 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 CEACAM4O75871 244 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 GAPDHP04406 335 aaKnown RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 OTX1P32242 354 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 CAV2P51636 162 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SNU13P55769 128 aaKnown RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 SLC10A1Q14973 349 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 RSPO4Q2I0M5 234 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 HAGHLQ6PII5 290 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 COMMD2Q86X83 199 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF283Q8N7M2 679 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 PP6455Q8WZ26 134 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 INTS12Q96CB8 462 aaKnown RBP10.81□□□□□ -0.68
COL4A6-204ENST00000461897 LYZL4Q96KX0 146 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 GPER1Q99527 375 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 CHST5Q9GZS9 411 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 NELFAQ9H3P2 528 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 ZDHHC11Q9H8X9 412 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 UQCC1Q9NVA1 299 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 POMT1Q9Y6A1 747 aa10.81□□□□□ -0.68
COL4A6-204ENST00000461897 F8W036 122 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 SPINK2P20155 84 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 MSR1P21757 451 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 OR3A2P47893 321 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 HOXA1P49639 335 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-204ENST00000461897 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 SRSF3P84103 164 aaKnown RBP10.8□□□□□ -0.68
COL4A6-204ENST00000461897 RAB32Q13637 225 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 ENDOGQ14249 297 aaKnown RBP10.8□□□□□ -0.68
COL4A6-204ENST00000461897 C3AR1Q16581 482 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 AAED1Q7RTV5 226 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 BHLHE23Q8NDY6 225 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 CSNK2A3Q8NEV1 391 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 OR51T1Q8NGJ9 327 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-204ENST00000461897 NRIP2Q9BQI9 281 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 TLNRD1Q9H1K6 362 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 DEFB127Q9H1M4 99 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 RCC2Q9P258 522 aaKnown RBP10.8□□□□□ -0.68
COL4A6-204ENST00000461897 TUBD1Q9UJT1 453 aa10.8□□□□□ -0.68
COL4A6-204ENST00000461897 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 IGKV3D-15A0A087WSY6 115 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 ZNF705EA8MWA4 302 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-204ENST00000461897 E9PLN8 166 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 DHRS3O75911 302 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 GLRA1P23415 457 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 CPT2P23786 658 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 SULT1A2P50226 295 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 C1QL2Q7Z5L3 287 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 BOLLQ8N9W6 283 aaKnown RBP10.79□□□□□ -0.68
COL4A6-204ENST00000461897 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 DMBX1Q8NFW5 382 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 FNDC9Q8TBE3 224 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 RBM24Q9BX46 236 aaKnown RBP10.79□□□□□ -0.68
COL4A6-204ENST00000461897 CNTNAP3Q9BZ76 1288 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 C1orf123Q9NWV4 160 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 EHFQ9NZC4 300 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 SPRR3Q9UBC9 169 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 TNRC6AQ8NDV7 1962 aaKnown RBP10.79□□□□□ -0.68
COL4A6-204ENST00000461897 PRRC2CQ9Y520 2896 aaKnown RBP10.79□□□□□ -0.68
COL4A6-204ENST00000461897 BSNQ9UPA5 3926 aa10.79□□□□□ -0.68
COL4A6-204ENST00000461897 DHRS7CA6NNS2 312 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 KLK10O43240 276 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 GFRA3O60609 400 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 CD5P06127 495 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 CTSDP07339 412 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 HKR1P10072 659 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PAX6P26367 422 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 BLVRBP30043 206 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PTGER4P35408 488 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 AKR1C2P52895 323 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 AKR1C1Q04828 323 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 FOXC1Q12948 553 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 UBE2V2Q15819 145 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 OR51F2Q8NH61 342 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 LYPD6BQ8NI32 183 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 283.2 ms