RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 STACQ99469 402 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 TMEM243Q9BU79 118 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 NUDT9Q9BW91 350 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 UGT2B28Q9BY64 529 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 TPK1Q9H3S4 243 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 SLC40A1Q9NP59 571 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 RBFOX1Q9NWB1 397 aaKnown RBP2.41□□□□□ -2.02
CCT4-203ENST00000461540 VNN3Q9NY84 501 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 TMEM9Q9P0T7 183 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCT4-203ENST00000461540 KIF25-AS1Q9Y6Z4 181 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 KIF21AQ7Z4S6 1674 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 CAMTA1Q9Y6Y1 1673 aa2.41□□□□□ -2.02
CCT4-203ENST00000461540 IGKV1-8A0A0C4DH67 115 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 KLF18A0A0U1RQI7 1052 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 EPOPA6NHQ4 379 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CEACAM18A8MTB9 384 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 ZNF705GA8MUZ8 300 aaPredicted RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 INS-IGF2F8WCM5 200 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TAAR5O14804 337 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 REM1O75628 298 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 DHRS3O75911 302 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CTDNEP1O95476 244 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 IGKV1D-16P01601 117 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TYMSP04818 313 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 P0C879 139 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 C8orf88P0DMB2 117 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CD99P14209 185 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TCN2P20062 427 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TAC1P20366 129 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 OMGP23515 440 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 DTYMKP23919 212 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 IFNGR2P38484 337 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 PPP1R2P41236 205 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SLCO1A2P46721 670 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 NMUP48645 174 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 RIPPLY3P57055 190 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 RAB25P57735 213 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 NUP107P57740 925 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 PPIDQ08752 370 aaKnown RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 MGAT3Q09327 533 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CEACAM16Q2WEN9 425 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 HLA-DRB5Q30154 266 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 ATP6AP1LQ52LC2 224 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 ACSM3Q53FZ2 586 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SPIN4Q56A73 249 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CLEC12AQ5QGZ9 265 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CLVS2Q5SYC1 327 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CST9Q5W186 159 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SPOPLQ6IQ16 392 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 PPP1R2P3Q6NXS1 205 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CASP12Q6UXS9 341 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 FAM183BPQ6ZVS7 135 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 TRAPPC5Q8IUR0 188 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 WDFY1Q8IWB7 410 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SLC26A10Q8NG04 563 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 OR5D18Q8NGL1 313 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 ABHD3Q8WU67 409 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 RNF138Q8WVD3 245 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 LRRC58Q96CX6 371 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 MRPL48Q96GC5 212 aaKnown RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 SNF8Q96H20 258 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 OR10C1Q96KK4 312 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 PACRGQ96M98 296 aaPredicted RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 OR2M2Q96R28 347 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 DHRS9Q9BPW9 319 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SELENOSQ9BQE4 189 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 C9orf16Q9BUW7 83 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 MRPL20Q9BYC9 149 aaKnown RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SLC25A39Q9BZJ4 359 aaPredicted RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 NYAP2Q9P242 653 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SLC22A13Q9Y226 551 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 C9orf84Q5VXU9 1444 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 CFAP65Q6ZU64 1925 aaKnown RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 THOC2Q8NI27 1593 aaKnown RBP2.4□□□□□ -2.03
CCT4-203ENST00000461540 EVC2Q86UK5 1308 aa2.4□□□□□ -2.03
CCT4-203ENST00000461540 SMARCA4P51532 1647 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 WDR62O43379 1518 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 TRAV8-2A0A0B4J237 113 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 PLAC8L1A1L4L8 177 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 NDUFC2-KCTD14E9PQ53 114 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 M0R1X1 148 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 DNASE2O00115 360 aaPredicted RBP2.39□□□□□ -2.03
CCT4-203ENST00000461540 CXCR6O00574 342 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 AZIN1O14977 448 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 CA11O75493 328 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 DCTN3O75935 186 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 NSA2O95478 260 aaKnown RBP2.39□□□□□ -2.03
CCT4-203ENST00000461540 INSP01308 110 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 IGKV5-2P06315 115 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 CTXN2P0C2S0 81 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 SPNP16150 400 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 HSD11B1P28845 292 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 PRSS3P35030 304 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 CXCL5P42830 114 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 CBX5P45973 191 aa2.39□□□□□ -2.03
CCT4-203ENST00000461540 LGALS7P47929 136 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms