RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 RPS2P15880 293 aaKnown RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 AZGP1P25311 298 aaKnown RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 HAAOP46952 286 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 GP2P55259 537 aaKnown RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 MZT1Q08AG7 82 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 SSX1Q16384 188 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 OLFML2AQ68BL7 652 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 ZNF529Q6P280 563 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 ZNF773Q6PK81 442 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 FIP1L1Q6UN15 594 aaKnown RBP12.16□□□□□ -0.46
NCK1-202ENST00000460960 LYPD2Q6UXB3 125 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 BRD3OSQ6XYD6 125 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 TMEM203Q969S6 136 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 MGLLQ99685 303 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 TMEM246Q9BRR3 403 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 MMP27Q9H306 513 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 ZCCHC4Q9H5U6 513 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 LRCH1Q9Y2L9 728 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 CMYA5Q8N3K9 4069 aa12.16□□□□□ -0.46
NCK1-202ENST00000460960 F5H0A9 414 aaPredicted RBP12.15□□□□□ -0.46
NCK1-202ENST00000460960 TIMM23O14925 209 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 GATBO75879 557 aaKnown RBP12.15□□□□□ -0.46
NCK1-202ENST00000460960 INMTO95050 263 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 GNB2P62879 340 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
NCK1-202ENST00000460960 TPBGQ13641 420 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 YIF1BQ5BJH7 314 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 MUC20Q8N307 709 aaPredicted RBP12.15□□□□□ -0.46
NCK1-202ENST00000460960 OR5T2Q8NGG2 359 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 OR5D18Q8NGL1 313 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 DERL3Q96Q80 235 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 SNTG1Q9NSN8 517 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
NCK1-202ENST00000460960 DOCK11Q5JSL3 2073 aa12.15□□□□□ -0.46
NCK1-202ENST00000460960 IGHV2-70DA0A0C4DH43 119 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 LRRC30A6NM36 301 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 SRRM5B3KS81 715 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 ZNF879B4DU55 563 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 J3QT63 122 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 LGALS8O00214 317 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
NCK1-202ENST00000460960 SULT1B1O43704 296 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 GYPAP02724 150 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 CD1AP06126 327 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 IRF2P14316 349 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 CPEP16870 476 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 IGFBP3P17936 291 aaPredicted RBP12.14□□□□□ -0.47
NCK1-202ENST00000460960 AMY2BP19961 511 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 MPZP25189 248 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 CFHR2P36980 270 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 FUT6P51993 359 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 ZNF404Q494X3 552 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 Q499Y3 187 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 TMEM91Q6ZNR0 172 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 SERPINA12Q8IW75 414 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 OR52N4Q8NGI2 321 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 UFD1Q92890 307 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 SLAMF9Q96A28 289 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 UPRTQ96BW1 309 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 ISYNA1Q9NPH2 558 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 NOX4Q9NPH5 578 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 MTCH1Q9NZJ7 389 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 CTSZQ9UBR2 303 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
NCK1-202ENST00000460960 IGKV1-12A0A0C4DH73 117 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 OOEPA6NGQ2 149 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 ANGPTL7O43827 346 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 MRPS14O60783 128 aaKnown RBP12.13□□□□□ -0.47
NCK1-202ENST00000460960 SC5DO75845 299 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 SERPINA3P01011 423 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 IGKV1D-12P01611 117 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 WNT2P09544 360 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 CALCBP10092 127 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 SELLP14151 372 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 POU3F4P49335 361 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 MTCP1P56278 107 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
NCK1-202ENST00000460960 ACSM3Q53FZ2 586 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 SLC25A26Q70HW3 274 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
NCK1-202ENST00000460960 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms