RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PRDX2P32119 198 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 GABRA2P47869 451 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 POU3F4P49335 361 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 IKZF1Q13422 519 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 BTN2A1Q7KYR7 527 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 OR14A2Q96R54 314 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 CCDC90BQ9GZT6 254 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 NEK6Q9HC98 313 aa17.07■□□□□ 0.32
RPUSD3-210ENST00000460909 ZNF879B4DU55 563 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 GPR37O15354 613 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 ECDO95905 644 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 KNG1P01042 644 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 ALDOBP05062 364 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 HCKP08631 526 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 ADRA2CP18825 462 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 BCL3P20749 454 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 MAP2K4P45985 399 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 CEBPDP49716 269 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 GPR50Q13585 617 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 C1QL2Q7Z5L3 287 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 ZNRF1Q8ND25 227 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 OR52N4Q8NGI2 321 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 OR5D18Q8NGL1 313 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 ST8SIA4Q92187 359 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 DERL3Q96Q80 235 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 METRNQ9UJH8 293 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 RPUSD1Q9UJJ7 312 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 AUP1Q9Y679 476 aa17.06■□□□□ 0.32
RPUSD3-210ENST00000460909 TRAV8-7A0A075B6U6 113 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 PIN1P1O15428 100 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 ENSAO43768 121 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 ANGPTL7O43827 346 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 KDM4BO94953 1096 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 EEF1B2P24534 225 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 CAV3P56539 151 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 GABARAPL2P60520 117 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 TPBGQ13641 420 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 TBCEQ15813 527 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 LRRC10Q5BKY1 277 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 BTNL3Q6UXE8 466 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 UNQ9370/PRO34162Q6UXP9 181 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 Q8IYB0 196 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 SAXO1Q8IYX7 474 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 LY6G5BQ8NDX9 201 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 ISYNA1Q9NPH2 558 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 RBFOX1Q9NWB1 397 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 IL36RNQ9UBH0 155 aa17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 SLC25A10Q9UBX3 287 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-210ENST00000460909 A0A1W2PPK0 400 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 CYB5AP00167 134 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 PPIAL4GP0DN37 164 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 FSTP19883 344 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 SRP14P37108 136 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 INSL4Q14641 139 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 FAM58AQ8N1B3 248 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 ZNF561Q8N587 486 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 MS4A15Q8N5U1 240 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 ZSCAN4Q8NAM6 433 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 EMG1Q92979 244 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 YTHDF1Q9BYJ9 559 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 SEBOXQ9HB31 216 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 TMEM138Q9NPI0 162 aa17.04■□□□□ 0.32
RPUSD3-210ENST00000460909 MAGEA13PA6NCF6 341 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 GABRPO00591 440 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 MRPS14O60783 128 aaKnown RBP17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 SC5DO75845 299 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 LIPFP07098 398 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 SFTPBP07988 381 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 TGFBR2P37173 567 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 PPP3R1P63098 170 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 MLLT11Q13015 90 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 KLF17Q5JT82 389 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 LIPKQ5VXJ0 399 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 TEX29Q8N6K0 151 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 C8orf46Q8TAG6 207 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 DCTN5Q9BTE1 182 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 MRI1Q9BV20 369 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 RHOFQ9HBH0 211 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 HMG20AQ9NP66 347 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 ACOT13Q9NPJ3 140 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 OR14J1Q9UGF5 321 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 FOXJ3Q9UPW0 622 aa17.03■□□□□ 0.32
RPUSD3-210ENST00000460909 MAGEB3O15480 346 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 ZNF737O75373 536 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 TMEM225BP0DP42 221 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 MMP9P14780 707 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 CPEP16870 476 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 BDKRB2P30411 391 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 GP2P55259 537 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 EMX1Q04741 257 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 ZNF146Q15072 292 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 ACSM3Q53FZ2 586 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 ASCL4Q6XD76 172 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 PNLDC1Q8NA58 520 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 TMEM185AQ8NFB2 350 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 PXT1Q8NFP0 134 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 NANPQ8TBE9 248 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 UFD1Q92890 307 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 UPRTQ96BW1 309 aa17.02■□□□□ 0.32
RPUSD3-210ENST00000460909 CPNE2Q96FN4 548 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms