RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 EXTL1Q92935 676 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 WDR13Q9H1Z4 485 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 WDR54Q9H977 334 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 EDARQ9UNE0 448 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 MED19A0JLT2 244 aaPredicted RBP10.2□□□□□ -0.78
NPHP4-204ENST00000460696 SMCO3A2RU48 225 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 WDR1O75083 606 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 JTBO76095 146 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 RPL23AP62750 156 aaKnown RBP10.2□□□□□ -0.78
NPHP4-204ENST00000460696 TCF15Q12870 199 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 FAM209AQ5JX71 171 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 VHLLQ6RSH7 139 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 ZDHHC23Q8IYP9 409 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 PTX4Q96A99 478 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 SLC25A31Q9H0C2 315 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 RAB18Q9NP72 206 aa10.2□□□□□ -0.78
NPHP4-204ENST00000460696 DEGS1O15121 323 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 CASP6P55212 293 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 SSPNQ14714 243 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 BPIFCQ8NFQ6 507 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 UFSP2Q9NUQ7 469 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 DNAJB11Q9UBS4 358 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 DUSP13Q9UII6 198 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 KIR2DS1A0A191URI9 304 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 C1orf196B1AJZ1 125 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 NKX2-8O15522 239 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 B3GALNT1O75752 331 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 TUSC2O75896 110 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 KIR2DS4P43632 304 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 UNC119Q13432 240 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 PIGYQ3MUY2 71 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 KIRREL1Q96J84 757 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 FAM173AQ9BQD7 235 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 PIPOXQ9P0Z9 390 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 GPR160Q9UJ42 338 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 FBXO7Q9Y3I1 522 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 MEX3AA1L020 520 aaKnown RBP10.19□□□□□ -0.78
NPHP4-204ENST00000460696 H3BP45 60 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 SIRPB1O00241 398 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 OR2A4O95047 310 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 TUBG1P23258 451 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 SELENOVP59797 346 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 PCOLCEQ15113 449 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 ZNF660Q6AZW8 331 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-204ENST00000460696 RPL7L1Q6DKI1 246 aaKnown RBP10.19□□□□□ -0.78
NPHP4-204ENST00000460696 SLC38A6Q8IZM9 456 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 GCNT2Q8N0V5 402 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 NFAM1Q8NET5 270 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-204ENST00000460696 POC1BQ8TC44 478 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 OR2A7Q96R45 310 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 CHST5Q9GZS9 411 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 FAM96BQ9Y3D0 163 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 KIAA1671Q9BY89 1806 aa10.19□□□□□ -0.78
NPHP4-204ENST00000460696 IGHV1-45A0A0A0MS14 117 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 FIGNL2A6NMB9 653 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 OR5AC1P0C628 307 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 MLF1P58340 268 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 MRPS34P82930 218 aaKnown RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 JMJD6Q6NYC1 403 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 TMEM182Q6ZP80 229 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SLC36A1Q7Z2H8 476 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SUMF2Q8NBJ7 301 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 TMEM178AQ8NBL3 297 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 OR5T1Q8NG75 326 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 KLF13Q9Y2Y9 288 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 ZNF106Q9H2Y7 1883 aaKnown RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SONP18583 2426 aaKnown RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 HPNP05981 417 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 GSK3AP49840 483 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 RHEBQ15382 184 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 C17orf82Q86X59 251 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 BVESQ8NE79 360 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 OR10J5Q8NHC4 309 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 AQP3Q92482 292 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 E5RGE8 158 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SSSCA1O60232 199 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 OR13C7P0DN81 318 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 FGF5P12034 268 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 ZBTB25P24278 435 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 AKR1C3P42330 323 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SRPXP78539 464 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 OR2T2Q6IF00 324 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 TUSC5Q8IXB3 177 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 SGK3Q96BR1 496 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 ZNF107Q9UII5 783 aaPredicted RBP10.18□□□□□ -0.78
NPHP4-204ENST00000460696 NSG2Q9Y328 171 aa10.18□□□□□ -0.78
NPHP4-204ENST00000460696 A0A1W2PNV4 684 aa10.17□□□□□ -0.78
NPHP4-204ENST00000460696 TAAR5O14804 337 aa10.17□□□□□ -0.78
NPHP4-204ENST00000460696 PDCD6O75340 191 aa10.17□□□□□ -0.78
NPHP4-204ENST00000460696 CST7O76096 145 aa10.17□□□□□ -0.78
NPHP4-204ENST00000460696 IGHMP01871 453 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms