RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SMN1Q16637 294 aaKnown RBP18.87■□□□□ 0.61
PTPN4-208ENST00000460289 AWAT1Q58HT5 328 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 PIP4P2Q8N4L2 257 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 DHRSXQ8N5I4 330 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 SETD9Q8NE22 299 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 OR51A4Q8NGJ6 313 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 OR5D13Q8NGL4 314 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 OR5AK2Q8NH90 309 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 SSMEM1Q8WWF3 244 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 COMMD4Q9H0A8 199 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 A0A0U1RQK1 487 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 RNASEK-C17orf49H0YIS7 233 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 INMTO95050 263 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 TK1P04183 234 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 MELTFP08582 738 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 UBE2E1P51965 193 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 FIP1L1Q6UN15 594 aaKnown RBP18.86■□□□□ 0.61
PTPN4-208ENST00000460289 OR10AC1Q8NH08 325 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 TNFRSF14Q92956 283 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 OPALINQ96PE5 141 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 C19orf12Q9NSK7 152 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 FBN3Q75N90 2809 aa18.86■□□□□ 0.61
PTPN4-208ENST00000460289 F8VVB4 439 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 F8VWA3 439 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 K7N7A8 449 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 ZFPL1O95159 310 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 CLIC3O95833 236 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 MT-ND2P03891 347 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 LIMS3P0CW19 117 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 LIMS4P0CW20 117 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 PEX2P28328 305 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 COL10A1Q03692 680 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 IL18R1Q13478 541 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 SERPINA12Q8IW75 414 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 OR5D14Q8NGL3 314 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 CNIH3Q8TBE1 160 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 ZCCHC4Q9H5U6 513 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 SEBOXQ9HB31 216 aaPredicted RBP18.85■□□□□ 0.61
PTPN4-208ENST00000460289 TENM1Q9UKZ4 2725 aa18.85■□□□□ 0.61
PTPN4-208ENST00000460289 TRBV2A0A0J9YWF9 115 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 hCG_1809904A0A1W2PP81 198 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 A0A1W2PPE2 198 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 A0A1W2PR64 198 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 A0A1W2PRV1 198 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 E9PI62 339 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 NPFFO15130 113 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 POU3F4P49335 361 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 ADARB1P78563 741 aaKnown RBP18.84■□□□□ 0.61
PTPN4-208ENST00000460289 PDZK1IP1Q13113 114 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 CCDC58Q4VC31 144 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 TMEM200BQ69YZ2 307 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 TMPRSS11AQ6ZMR5 421 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 ASCC1Q8N9N2 400 aaKnown RBP18.84■□□□□ 0.61
PTPN4-208ENST00000460289 EMG1Q92979 244 aaKnown RBP18.84■□□□□ 0.61
PTPN4-208ENST00000460289 TNFRSF19Q9NS68 423 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 SF3B6Q9Y3B4 125 aaKnown RBP18.84■□□□□ 0.61
PTPN4-208ENST00000460289 HSPE1-MOB4S4R3N1 261 aa18.84■□□□□ 0.61
PTPN4-208ENST00000460289 ALX3O95076 343 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 CRYBA1P05813 215 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 FBP1P09467 338 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 IER3P46695 156 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 ACSM1Q08AH1 577 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 LDLRAD3Q86YD5 345 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 FAM58AQ8N1B3 248 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 OR4M1Q8NGD0 313 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 OR13C9Q8NGT0 318 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 PDCD1LG2Q9BQ51 273 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 DPAGT1Q9H3H5 408 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 GLS2Q9UI32 602 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 DHDHQ9UQ10 334 aa18.83■□□□□ 0.6
PTPN4-208ENST00000460289 FAM181BA6NEQ2 426 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 MYL12AP19105 171 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 DLX1P56177 255 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 PRB3Q04118 309 aaPredicted RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 KLRD1Q13241 179 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 MED21Q13503 144 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 OGFRL1Q5TC84 451 aaPredicted RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 RPL22L1Q6P5R6 122 aaKnown RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 PARP16Q8N5Y8 322 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 TSEN15Q8WW01 171 aaKnown RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 SNX22Q96L94 193 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 CHIAQ9BZP6 476 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 HEXA-AS1Q9H8Q6 139 aa18.82■□□□□ 0.6
PTPN4-208ENST00000460289 CHCHD3Q9NX63 227 aaKnown RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 DIMT1Q9UNQ2 313 aaKnown RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 EXOSC1Q9Y3B2 195 aaKnown RBP18.82■□□□□ 0.6
PTPN4-208ENST00000460289 MEIOCA2RUB1 952 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 CASQ2O14958 399 aaPredicted RBP18.81■□□□□ 0.6
PTPN4-208ENST00000460289 SPRY1O43609 319 aaPredicted RBP18.81■□□□□ 0.6
PTPN4-208ENST00000460289 ZNF737O75373 536 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 BCL3P20749 454 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 NPBWR2P48146 333 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 ETV1P50549 477 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 GTF2A1P52655 376 aaPredicted RBP18.81■□□□□ 0.6
PTPN4-208ENST00000460289 RPL15P61313 204 aaKnown RBP18.81■□□□□ 0.6
PTPN4-208ENST00000460289 SPIN3Q5JUX0 258 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 GDPD3Q7L5L3 318 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 TMEM80Q96HE8 168 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 RHOFQ9HBH0 211 aa18.81■□□□□ 0.6
PTPN4-208ENST00000460289 RBFOX1Q9NWB1 397 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms