RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ASCL4Q6XD76 172 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 TNFAIP8L1Q8WVP5 186 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 GAFA1Q96PS6 74 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 EXOSC4Q9NPD3 245 aaKnown RBP8.91□□□□□ -0.98
UBR4-208ENST00000459947 M0R1W7 72 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 ZNF93P35789 620 aaPredicted RBP8.91□□□□□ -0.98
UBR4-208ENST00000459947 LCN2P80188 198 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 ACSM3Q53FZ2 586 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 SFRP4Q6FHJ7 346 aaPredicted RBP8.91□□□□□ -0.98
UBR4-208ENST00000459947 OR51A4Q8NGJ6 313 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 ZMAT3Q9HA38 289 aaKnown RBP8.91□□□□□ -0.98
UBR4-208ENST00000459947 SPACA1Q9HBV2 294 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 HMG20AQ9NP66 347 aa8.91□□□□□ -0.98
UBR4-208ENST00000459947 SIRT4Q9Y6E7 314 aaPredicted RBP8.91□□□□□ -0.98
UBR4-208ENST00000459947 MAST4O15021 2626 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 DVL1O14640 695 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 ADRA2CP18825 462 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FPR2P25090 351 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
UBR4-208ENST00000459947 PAX8Q06710 450 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 RSU1Q15404 277 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 ARMCX4Q5H9R4 360 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 NHLRC3Q5JS37 347 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM201AQ5SY85 155 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 ZNF841Q6ZN19 808 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 ST8SIA4Q92187 359 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 CCL13Q99616 98 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 RAB9BQ9NP90 201 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 F8P00451 2351 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A18PA6NE21 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 RHBDL1O75783 438 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 CSTBP04080 98 aaKnown RBP8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 FGF12P61328 243 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 ZNF146Q15072 292 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 TIMM50Q3ZCQ8 353 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 XAF1Q6GPH4 301 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 SLAMF9Q96A28 289 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 DCTN5Q9BTE1 182 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 C7orf69Q9H7B7 122 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 METRNQ9UJH8 293 aa8.9□□□□□ -0.98
UBR4-208ENST00000459947 IGHV3OR15-7A0A075B7D8 119 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 UCHL1P09936 223 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 HSMCR30P0CW71 290 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 ZP1P60852 638 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 TMEM185AQ8NFB2 350 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 Q8NFD4 153 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 OR5M11Q96RB7 305 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 CNTD2Q9H8S5 307 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 SNTG1Q9NSN8 517 aa8.9□□□□□ -0.99
UBR4-208ENST00000459947 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 CCRL2O00421 344 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 RBP4P02753 201 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 RPS11P62280 158 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBR4-208ENST00000459947 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 METTL11BQ5VVY1 283 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 NCR3LG1Q68D85 454 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 FAHD2BQ6P2I3 314 aaPredicted RBP8.89□□□□□ -0.99
UBR4-208ENST00000459947 LYPD2Q6UXB3 125 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 ANGPTL5Q86XS5 388 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 ZFP41Q8N8Y5 198 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 FAHD2AQ96GK7 314 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 OR14A2Q96R54 314 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 SMR3AQ99954 134 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 SUCNR1Q9BXA5 334 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 PPP1R3EQ9H7J1 279 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 MTCH1Q9NZJ7 389 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 RPUSD1Q9UJJ7 312 aaKnown RBP8.89□□□□□ -0.99
UBR4-208ENST00000459947 H3BSH0 61 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 TMEM127O75204 238 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 HAND1O96004 215 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 MYL9P24844 172 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 MPV17LQ2QL34 196 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 KRTAP21-3Q3LHN1 58 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 SATL1Q86VE3 508 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 UPRTQ96BW1 309 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 CST11Q9H112 138 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 GSTK1Q9Y2Q3 226 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 IGKV1-27A0A075B6S5 117 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 A6NIN4 97 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 GABRPO00591 440 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 GLAP06280 429 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 PRKACAP17612 351 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 ERP29P30040 261 aaKnown RBP8.89□□□□□ -0.99
UBR4-208ENST00000459947 PTGFRP43088 359 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms