RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SOX2P48431 317 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 ARF6P62330 175 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 PPP3R1P63098 170 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 BDH1Q02338 343 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 XAF1Q6GPH4 301 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 CD177Q8N6Q3 437 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 KIR3DL3Q8N743 410 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 ZSCAN4Q8NAM6 433 aaPredicted RBP13.36□□□□□ -0.27
CD28-203ENST00000458610 ZNF485Q8NCK3 441 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 ZNRF1Q8ND25 227 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 OR5D13Q8NGL4 314 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 C8orf46Q8TAG6 207 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 EMG1Q92979 244 aaKnown RBP13.36□□□□□ -0.27
CD28-203ENST00000458610 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 PCGF1Q9BSM1 259 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 ARHGAP32A7KAX9 2087 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 ZFHX3Q15911 3703 aa13.36□□□□□ -0.27
CD28-203ENST00000458610 A0A1B0GW55 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 A0A1W2PQ09 198 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 ALDOBP05062 364 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L2P0CJ85 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L3P0CJ86 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L4P0CJ87 422 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L5P0CJ88 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L6P0CJ89 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L7P0CJ90 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 TMEM225BP0DP42 221 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 BMXP51813 675 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 KISS1Q15726 138 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 Q499Y3 187 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4L9Q6RFH8 374 aaPredicted RBP13.35□□□□□ -0.27
CD28-203ENST00000458610 C1orf122Q6ZSJ8 110 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 FAM58AQ8N1B3 248 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 PPP1R35Q8TAP8 253 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 Q9H521 79 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 DUX4Q9UBX2 424 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
CD28-203ENST00000458610 SIRT4Q9Y6E7 314 aaPredicted RBP13.35□□□□□ -0.27
CD28-203ENST00000458610 INMTO95050 263 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 LALBAP00709 142 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 CELP19835 753 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 ACSM1Q08AH1 577 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 KLF17Q5JT82 389 aaPredicted RBP13.34□□□□□ -0.27
CD28-203ENST00000458610 SPIN3Q5JUX0 258 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 C9orf139Q6ZV77 190 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 ZFAND2BQ8WV99 257 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 RGP1Q92546 391 aaPredicted RBP13.34□□□□□ -0.27
CD28-203ENST00000458610 GPER1Q99527 375 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 SIRPDQ9H106 197 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 DUSP21Q9H596 190 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 ONECUT1Q9UBC0 465 aa13.34□□□□□ -0.27
CD28-203ENST00000458610 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 TRBV5-5A0A0J9YX44 114 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 hCG_1809904A0A1W2PP81 198 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 A0A1W2PPE2 198 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 A0A1W2PR64 198 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 A0A1W2PRV1 198 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 TRIM77I1YAP6 450 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 K7N7A8 449 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 M0R1W7 72 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SH2D1BO14796 132 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.28
CD28-203ENST00000458610 RGS10O43665 173 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 FCN3O75636 299 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 KDM4BO94953 1096 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 TK1P04183 234 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SELLP14151 372 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 MAPK3P27361 379 aaPredicted RBP13.33□□□□□ -0.28
CD28-203ENST00000458610 HILS1P60008 231 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SLC35A2P78381 396 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SPHARQ15513 63 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 RBM48Q5RL73 367 aaKnown RBP13.33□□□□□ -0.28
CD28-203ENST00000458610 ZNF529Q6P280 563 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SATL1Q86VE3 508 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 BATF2Q8N1L9 274 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 MS4A15Q8N5U1 240 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SNX22Q96L94 193 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 CNBD2Q96M20 576 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 SLC6A7Q99884 636 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 HMG20AQ9NP66 347 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 PCDHB16Q9NRJ7 776 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 TAS2R4Q9NYW5 299 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 ZNF69Q9UC07 566 aa13.33□□□□□ -0.28
CD28-203ENST00000458610 F8VVB4 439 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 F8VWA3 439 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 GPX5O75715 221 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 HAND1O96004 215 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 TFF1P04155 84 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 IGHV4-38-2P0DP08 117 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 MMP9P14780 707 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 PRKACAP17612 351 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 BCL3P20749 454 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 BDKRB2P30411 391 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms